KEGG   Chromobacterium phragmitis IIBBL 112-1: DK842_08190
Entry
DK842_08190       CDS       T05549                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
chri  Chromobacterium phragmitis IIBBL 112-1
Pathway
chri03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:chri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DK842_08190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chri03400]
    DK842_08190
Enzymes [BR:chri01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     DK842_08190
DNA repair and recombination proteins [BR:chri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     DK842_08190
 Prokaryotic type
     DK842_08190
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AXE29870
Position
1730546..1731268
AA seq 240 aa
MPSLNYLAPAFARVHPDWEAVLRQPAIAARLADIDRQLAQQIETGKTLFPPAPQAFNALS
FASPADVKVVILGQDPYHGDGEAMGLSFSVPDGIRVPPSLRNIYKELAADLGLGVPAGGD
LTHWAQQGVLLLNSVFTVERDKAGSHGKLGWQAVSDALIDAVNRDNPGCVFLLWGNWAQT
KAERIDAGRHLVLTAAHPSPLSASRGFHGCRHFSQVNAWLIARGRQPVRWAAPAAQNSLF
NT seq 723 nt   +upstreamnt  +downstreamnt
atgccttcactgaactacctcgccccagccttcgcccgcgtccacccggattgggaggcc
gtgctgcgacagcccgccatcgccgcccgcctggccgacatcgaccgccagctggcccag
cagatcgagaccggcaaaaccctgtttcccccggcgccgcaggccttcaacgcgctgagc
tttgcctcgccggccgacgtcaaggtggtgatcctgggccaagacccctaccatggcgac
ggcgaggcgatgggcctgtcgttctcggtgccggatggcatccgcgtgccgccgtccctg
cgcaacatttacaaggagctggcggccgatctgggcctgggcgtgccggccggcggcgat
ctcacccactgggcgcagcagggcgtgctgctgctcaacagcgtgttcaccgtcgagcgc
gacaaggccggcagccatggcaagctgggctggcaagccgtcagcgacgcgctgatcgac
gcagtcaaccgcgacaaccccggctgcgtgttcctgctgtggggcaattgggcgcagacc
aaggccgaacgcatcgacgccggccgccacctagtgctgaccgccgcccacccttccccc
ttgtccgccagccgaggcttccacggctgccgccacttctcccaggtcaatgcctggctg
atcgcgcgtggccgccagccggtgcgctgggccgcccccgccgcgcaaaacagcctgttt
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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