KEGG   Chromobacterium phragmitis IIBBL 112-1: DK842_16585
Entry
DK842_16585       CDS       T05549                                 
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
chri  Chromobacterium phragmitis IIBBL 112-1
Pathway
chri03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:chri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DK842_16585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chri03400]
    DK842_16585
DNA repair and recombination proteins [BR:chri03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DK842_16585
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DK842_16585
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 AAA_23 nSTAND3 nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG AAA_22 AAA_21 AAA_25 NACHT APS_kinase BCA_ABC_TP_C T2SSE cobW Viral_helicase1 NTPase_1 ExoX-like_C
Other DBs
NCBI-ProteinID: AXE31374
Position
3506852..3509683
AA seq 943 aa
MDSIRIRGARTHNLKNVNLDLPRNQLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARVGDPHC
PEHNVPLSSQTVSQMVDHVLALPEDTRMMILAPVIVGRKGENLDLFDDLRAQGFVRVRVD
GEVYELDAVPKLDKNKKHTVEVVIDRLKVRADMQQRLAESFETALRHAEGRAIAVEMDSG
KEHWFSAKFACPVCSYSLPELEPRLFSFNNPMGACPKCDGLGEITFFDPKRVVAHPELSL
ASGAIKGWDKRNQFYYQMLLALGEHYGFSVNDLAFDDLPEKVKHVVLHGSGRDSIEFSYM
SEKGTKFSRAHPFEGIIPNLERRYRETDSMAVREELAKYQNNQACPHCSGSRLRLEARHV
FIGTRTLHEINQLPLKETADFFEGLEFTGQKQAVAEKIVKEIRERVSFLNNVGLDYLNLS
RSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLGTLKRLRDLGNSV
IVVEHDEDAIREADYLVDMGPGAGEHGGEVLVAGTPADVAASENSVTGAFLSGRRKIALP
GGRRELGEERMLQLIGATGNNLKDVTLNLPLGGLVCITGVSGSGKSTLINDTLYKIAARD
LNGASEEPSPYREIKGLDQLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFSGVPLAR
ERGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCHGKRYNRETLEVQYKG
KSIQEVLEMTVEQALEFFAVVPPVARKLKTLMDVGLGYIRLGQSATTLSGGEAQRVKLGL
ELSKRDTGRTLYILDEPTTGLHFHDIDLLLQVLHRLRESGNTVVVIEHNLDVVKTADWLI
DLGPEGGAGGGQIIASGTPEQVAAHPASHTGRYLAPLLARDQG
NT seq 2832 nt   +upstreamnt  +downstreamnt
atggacagcatccgaatccgtggcgcccgcacccacaatctgaagaacgtcaacctggat
ttgccgcgcaaccagttgatcgtgattaccggcctgtccggctccggcaagtcctcgctg
gccttcgacaccctgtacgcagaggggcagcgccgctacgtggaaagcctgtcggcctac
gcgcggcagttcctgcaattgatggaaaagccggacgtggacctgatcgagggcctgtcg
cctgccatttccatcgagcagaaggccaccagccataacccgcgctccactgtcggcact
gtcaccgaaatccacgactacctgcgcctgctgttcgcccgcgtcggcgacccgcattgc
ccggagcacaacgtgccgctgtccagccagaccgtcagccagatggtggaccatgtgctg
gcgctgccggaagatacgcggatgatgatcctggcgccggtcatcgtcggccgcaagggc
gaaaacctggacctgttcgacgacctgcgcgcgcagggcttcgtccgcgtgcgggtggac
ggcgaggtgtacgagctggacgcggtgcccaagctggacaagaacaagaagcataccgtc
gaggtggtgatagaccgcttgaaagtgcgcgcggacatgcagcagcggctggccgagagc
ttcgagaccgcgctgcgccacgccgagggccgcgccatcgccgtggaaatggatagcggc
aaggagcactggttctccgccaagttcgcctgcccggtatgcagctacagcctgccggag
ctggagccgcggctgttctcgttcaacaacccgatgggcgcctgccccaagtgcgacggc
ctgggcgagatcaccttcttcgaccccaagcgcgtggtcgcgcacccggagctttccctc
gcttccggcgcgatcaagggctgggacaagcgcaaccagttctactaccagatgctgctg
gcgctgggcgagcactatggtttctcggtcaatgacctggctttcgacgacttgccggag
aaggtcaagcacgtggtgctgcacggctccggccgcgacagcatagaattcagctatatg
tcggagaagggcaccaagttcagccgcgcccatccgttcgagggcatcattcccaatctg
gagcgccgctaccgcgaaaccgactccatggcggtgcgcgaggagctggccaagtaccag
aacaaccaggcctgcccgcattgcagcggctcccggctgcggctggaggcgcgccacgtg
ttcatcggcacgcgcacgctgcatgaaatcaatcaactgccgctgaaggaaacggcggac
ttcttcgagggattggaattcaccggccagaagcaggcggtggcggagaagatcgtcaag
gaaatccgcgagcgggtgtccttcctcaacaatgtgggcctggattacctgaacctgtcc
cgctccgccgacaccctgtccggcggcgaggcgcagcgcatccggctggccagccagatc
ggctccggcctgaccggcgtgatgtatgtgctggacgagccgtccatcggcctgcaccag
cgcgacaacgaccgcctgctgggcacgctgaagcgcctgcgcgacctaggcaacagcgtg
atcgtggtcgagcatgacgaagatgcgatccgcgaggctgactacctggtggacatgggc
cccggcgctggcgagcacggcggcgaagtgctggtcgccggcacgccggccgacgtggcc
gctagcgagaactcggtcaccggcgccttcctgtccggccgccgcaagatcgcgctgccg
gggggccgccgcgagctgggcgaagagcgcatgctgcagctgatcggcgccaccggcaac
aacctgaaggacgtgacgctgaacctgccgctgggcggcctggtgtgcatcaccggcgtg
tccggctccggcaagtccacgctgatcaacgacacgctgtacaagatcgccgcgcgcgat
ctgaacggcgccagcgaggagccgtccccgtatcgcgagatcaaggggctggaccagctg
gacaaggtgatcaacgtcgaccagagcccgatcggccgcacgccgcggtccaacccggcc
acctacaccggcctgttcacgccgatacgcgagctgttctccggcgtgccgctggcgcgc
gagcgcggctacggcccgggccgcttctcgttcaacgtcaagggcggccgctgcgaggcc
tgccagggcgacggcgtgatcaaggtggagatgcacttcctgccggacatctacgtgccc
tgcgacgtctgccacggcaagcgctacaaccgcgagacgctggaagtgcagtacaagggc
aagagcatccaggaagtgctggagatgacggtggagcaggcgctggagttcttcgccgtg
gtgccgccggtggcgcgcaagctcaaaaccttgatggacgtgggtctgggctacatccgc
ctgggccagagcgccaccacgctgtccggcggcgaggcgcagcgggtgaagctgggcctg
gaactctccaagcgcgacaccggccgaacgctgtatattctggacgaaccgaccaccggc
ctgcacttccacgacatagacctcttgctgcaggtgctgcaccgcctgcgcgagagcggc
aacaccgtggtggtgatcgagcacaatctggacgtggtgaaaaccgcggactggctgatc
gatctggggccggaaggcggcgccggcggcggccagatcatcgccagcggcacgccggaa
caggtggcggcccatccggccagccacaccggccgttatctggcgccgctgctggcgcgg
gaccagggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (22)   
   Pfam (22)   
All databases (29)   

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