KEGG   Chromobacterium phragmitis IIBBL 112-1: DK842_18290
Entry
DK842_18290       CDS       T05549                                 
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
chri  Chromobacterium phragmitis IIBBL 112-1
Brite
KEGG Orthology (KO) [BR:chri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:chri03009]
    DK842_18290
Enzymes [BR:chri01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     DK842_18290
Ribosome biogenesis [BR:chri03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    DK842_18290
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AXE31680
UniProt: A0A344UCK9
Position
complement(3835949..3837046)
AA seq 365 aa
MTDPYIDPDDYSDISENEVSTTQLLEVPLSLCGERLDAALAKLLPDYSRSRLTQWVKDGL
VKVDGQAVAPKTKMLGGEKLEVTLQLTNEEMAFQPEPMDLSIVFEDDHILVINKPAGLVV
HPAAGNWSGTLLNGLLHHCPALANVPRAGIVHRLDKDTSGLMVVAKTVPAQTELVRQMQA
RTVKRVYRAIADGVVPFDGTIDANIGRDANNRLKMAVLKFGGKPAITHIRVLERFASHSH
IECKLETGRTHQIRVHMREAGHPLAGDPVYGNPRHKMDEDIAAGVRALGRQALHAFALAL
IHPASGEERSWKAPLPDDFRALLGLLRGDGAAADDETFAHGDGEDDEDWDDDDDDDGDVE
VIYAR
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgactgatccttacattgacccggacgattatagcgacatctcggaaaacgaggtatcc
accacgcaacttcttgaggtgccgctttcgctatgcggcgaacggcttgacgccgcgctg
gccaagctgctgcccgattactcacgcagccggctgactcaatgggtcaaagacgggctg
gtgaaggtggacggccaggcggtcgcgcccaagaccaagatgctgggcggcgagaagctg
gaagtcacgctgcagctcaccaatgaagaaatggccttccagccggagccgatggatctg
tccatcgtgttcgaggacgaccacatcctggtgatcaacaagcctgccggcctggtggtg
caccccgccgccggcaactggagcggcaccttgctcaacggcctgctgcaccactgcccg
gcgctggccaacgtaccacgcgccggcatcgtccaccggctggacaaggacacctccggc
ctgatggtggtggccaagaccgtgccggcgcaaaccgagctggtgcgccagatgcaggcg
cgcaccgtcaagcgcgtctaccgcgccatcgccgacggcgtggtgccctttgacggcacc
atagacgccaatatcggccgcgacgcgaacaaccgcctgaaaatggctgtgctgaagttc
ggcggcaagccggccatcacccatatccgcgtactggaacgcttcgccagccactcgcac
atcgagtgcaagctggaaaccggccgcacccaccagattcgcgtccacatgcgcgaagcc
ggacatccgttggccggcgacccggtgtatggcaatccgcgccacaagatggatgaagac
atcgccgccggcgtcagggcgctgggccgccaggcgctacacgctttcgcgctggcgctg
attcatcccgcctccggcgaagaacgcagctggaaagcgccgctgccggacgacttccgc
gccctgctgggcctgctgcgcggcgacggcgcggcggcggacgacgaaaccttcgcccat
ggcgatggcgaggatgacgaagattgggacgatgacgacgatgatgacggcgacgtcgag
gtgatctatgcccgataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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