KEGG   Chromobacterium paludis: FYK34_03185
Entry
FYK34_03185       CDS       T06224                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
chrm  Chromobacterium paludis
Pathway
chrm03030  DNA replication
chrm03430  Mismatch repair
chrm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:chrm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FYK34_03185
   03430 Mismatch repair
    FYK34_03185
   03440 Homologous recombination
    FYK34_03185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chrm03032]
    FYK34_03185
   03400 DNA repair and recombination proteins [BR:chrm03400]
    FYK34_03185
Enzymes [BR:chrm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FYK34_03185
DNA replication proteins [BR:chrm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FYK34_03185
DNA repair and recombination proteins [BR:chrm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FYK34_03185
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_16 AAA_22 AAA_5 AAA_14 AAA_18 AAA_30 ResIII nSTAND3 TIP49 Mg_chelatase AAA_19 PIF1 Rad17 AAA_7 TsaE Herpes_Helicase AAA_24 NTPase_1 Zeta_toxin AAA_28 SKI T2SSE RsgA_GTPase DUF815 VapE-like_dom ABC_tran TniB Sigma54_activat
Other DBs
NCBI-ProteinID: QEL54636
UniProt: A0A5C1DD30
Position
703468..705393
AA seq 641 aa
MSYQVLARKWRPKRFADLVGQEHVVRALSNALKEQRLHHAYLLTGTRGVGKTTIARILAK
SLNCETGTTAEPCGECQACRQIDAGRYVDLLEIDAASNTGIDNIREVLENAQYAPTMGRF
KVYIIDEVHMLSKSAFNAMLKTLEEPPGHVKFILATTDPQKVPVTVLSRCLQFSLRNMTP
QQVSSHLAHMLDVEGIHYEAPALALLGRAASGSMRDAQSLLDQAIAYGMGEVKEDGVRAM
LGAVDRRYLFSLLQALAAADGPLLMAEADKLAERGISFDAALAELAVLLQQLALAQTVPA
ALADDEPEREAIFALADAIAPQDVQLYYQIAIHGRKDLALAPDEHAGFNMTLLRMLAFHP
VNAPAESAAPTRPAAPSQPRPAAASAMAAASVSLPAERGLSPAARALQAAGLGNQAKTAP
RAEPDEAAAPAEPEPEPAPRPQAVAQVQPAPAPAAPQPGTAPSSPRAAVPSPVEEADERD
DEEIVDTPWQQDEDGLPDYAMQPPLEDEPVSYCFDGDWPRLVAELGAKLGAARMLAHNAV
LKNWSQSRLELAVPESFRHMSGRDYQEKLKAALADRFGHAVELAVTVEELGIETPAMTGA
RLRQEQLAAARECLQNDPVVQQMVREFGATLLIETIQPVQE
NT seq 1926 nt   +upstreamnt  +downstreamnt
atgagctatcaagtccttgcccgcaagtggcgtcccaagcgcttcgccgacctggtcggc
caggagcatgtggtccgcgccctgtccaacgccctcaaagagcagcggctccatcacgcc
tacctgctgaccggcacccggggggtgggcaagaccactatcgcccgcattctggccaag
agcctgaactgcgaaaccggcaccacggcggagccttgcggcgaatgccaggcctgccgc
cagatcgacgccggccgctatgtggacctgctggagatcgacgccgcgtccaacaccggc
atcgacaatatccgcgaagtgctggaaaacgcgcagtacgcgccgaccatgggccgcttc
aaggtctacatcatcgacgaagtgcacatgctgtccaagagcgccttcaatgcgatgctg
aagacgctggaggagccgcccggccacgtcaagttcatcctggccaccaccgatccgcag
aaagtgccggtgacggtgctgagccgctgcctgcagttttccctgcgcaatatgacgccg
cagcaggtgtccagccatctggcccacatgctggacgtggaaggcatccattacgaggcg
ccggcgctggcgctgctgggccgcgccgcctcgggttcgatgcgggacgcgcagtccttg
ctggatcaggctatcgcctacggcatgggcgaagtcaaggaagacggcgtgcgcgccatg
ctgggcgcggtggaccgccgctacctgttttctctgctgcaggccctggccgcggccgac
ggccccttgctgatggccgaggccgacaagctggctgaacgcggcatcagcttcgacgcc
gccttggcggaactggccgtgctgctgcagcaactggcgctggcgcagaccgtgcctgcg
gcgctggccgacgacgagccggagcgcgaggccatctttgcgctggccgacgccatcgcg
ccgcaggacgtgcagctttactatcaaatcgccatccacggccgcaaggacttggccctg
gcgccggatgagcacgccggcttcaatatgaccttgctgcgcatgctggccttccatccg
gtcaacgcgccggcggaaagcgccgcgcctacgcgcccggccgcgcccagccagccgcgt
ccggcggcggcttccgccatggccgcggccagcgtgtcgctgccggcggagcggggcctg
tctccggcagcgcgcgccttgcaggccgccggtcttggcaatcaggccaagaccgcgccg
cgcgccgagccggatgaggccgcggccccggcagagcccgagcccgagcccgcccctagg
ccgcaagccgtcgctcaggttcagcccgcgcccgcgccggcggctccccagcccggaacc
gcgccgtcctcgccccgcgcagccgtgccttcgccggtagaggaggccgacgagcgcgac
gacgaggagatcgtcgatacgccctggcagcaggacgaggatggcttgcccgattacgcc
atgcaaccgccgctggaagacgagcctgtcagctactgctttgacggcgactggccgcgg
ctggtggcggagttgggcgccaagctcggcgcggcgcgcatgctggcgcataatgcggta
ttgaagaactggagccagagccggctggagctggcggtgcccgagagcttccgccacatg
agcggacgcgactaccaggaaaaactcaaagccgcgctggccgaccgtttcggccacgcg
gtggaactcgcggtgacggtggaggagctggggatagaaaccccggccatgaccggcgcc
cgcttgcgccaggagcagttggccgccgcccgcgagtgtttgcaaaacgatccggtggtg
cagcagatggtgcgcgagttcggcgccacgctgctcatcgagaccattcaacccgtacag
gagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (33)   
   Pfam (33)   
All databases (45)   

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