KEGG T06224: FYK34

Chromobacterium paludis: FYK34_12550

Entry

FYK34_12550       CDS       T06224

Name

(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

chrm Chromobacterium paludis

Brite

KEGG Orthology (KO) [BR:chrm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:chrm03009]
    FYK34_12550
Enzymes [BR:chrm01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     FYK34_12550
Ribosome biogenesis [BR:chrm03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    FYK34_12550

SSDB

Motif

Pfam:

Methyltr_RsmB-F Methyltr_RsmF_N Methyltransf_31 Ubie_methyltran Methyltransf_25 FtsJ Methyltransf_33 Methyltransf_15

Other DBs

NCBI-ProteinID:

QEL56328

UniProt:

A0A5C1DKP0

Position

2685956..2687215

AA seq 419 aa
MHISHSQLKHLETVIGQMTRFDRPADAVLSAYFREHNKLGSADRHLIAETAFGALRRLIQ
LRALIAPEKATPRRLALVALMKFNKMNVKELTEATSAGEREWLGTVKGKALEDSLEIRAE
LPQWVIERLGDQTPEAVEALGQGLMSMAPLDLRVNTMKMKREELLDRLNAEGIACAPTPY
SPLGIRLKDKPALSRHELFKAGAFEVQDEGSQLLGLITGARRGEMVVDFCAGAGGKTLLL
GAQMSSSGRLYAFDVSEKRLANFKPRQARSGLSNVHPQLLAHENDAKVKRLAGKADRVLV
DAPCSGLGTLRRNPDLKFRQNPDSVAELNAKQASILASASRLVKNGGRLVYATCSLLPQE
NQAIVQAFLAEHPDFRLVKMDEVLAEQKIPLQCGDYLELKPHLHNTDGFFAAVLEKTGA

NT seq 1260 nt +upstreamnt +downstreamnt
atgcacattagccatagccaactgaaacacctggaaaccgtcatcggccagatgacccgc
ttcgaccgccccgccgacgccgtgctgtccgcctacttccgcgagcacaacaagctgggc
agcgccgaccgccacctgatcgccgaaaccgcgtttggcgccctgcgccgcctgatccag
ctgcgcgcgctgatcgcgccggaaaaagccacgccgcgccgcctggccctggtggccttg
atgaagttcaacaagatgaacgtcaaggagctgaccgaggccaccagcgccggcgaacgc
gaatggctgggcacggtcaagggcaaggcgctggaggacagcctggaaatccgcgccgaa
ctgccgcaatgggtgatagagcgcctgggcgaccaaacgccggaagcggtggaagccttg
ggccagggcctgatgtccatggcgccgctggacctgcgcgtcaacaccatgaagatgaag
cgcgaggagctgctggatcgcctcaacgccgaaggcatcgcctgcgcgccgacgccgtac
tccccgctgggcatccgcctgaaggacaagccggcgctgtcccgccacgagctgttcaag
gctggcgcgttcgaggtgcaggacgagggcagccagctcctgggcctgatcaccggcgcg
cgccgcggcgagatggtggtggacttctgcgccggcgccggcggcaaaaccctgcttttg
ggcgcgcagatgtcatccagcggccgactgtacgcgtttgatgtatcagagaagcgcctc
gccaacttcaagccgcgccaagctcgctccggcctgtccaatgtgcacccgcaattgctg
gcgcacgaaaacgacgccaaggtgaagcgcctggccggcaaggccgaccgcgtgctggtg
gacgcgccctgctccggcctgggcaccctgcgccgcaacccagacctgaaattccgccag
aacccggacagcgtggccgagctgaacgccaagcaggcgtccatcctcgcctccgcctcc
cgcctggtgaaaaacggcggccggctggtctacgccacctgcagcctgttgccgcaggaa
aaccaggccatcgtccaggccttcctggccgagcacccggacttccgcctggtgaagatg
gatgaggtgctggccgagcagaaaatcccgctgcaatgcggcgactacctggagctgaag
ccgcatttgcataacaccgacggcttcttcgccgcggtgctggaaaaaactggcgcataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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