KEGG   Cytophaga hutchinsonii: CHU_0924
Entry
CHU_0924          CDS       T00385                                 
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase A
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
K01924  UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
Organism
chu  Cytophaga hutchinsonii
Pathway
chu00470  D-Amino acid metabolism
chu00550  Peptidoglycan biosynthesis
chu01100  Metabolic pathways
chu01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:chu00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CHU_0924 (ddlA)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    CHU_0924 (ddlA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    CHU_0924 (ddlA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:chu01011]
    CHU_0924 (ddlA)
Enzymes [BR:chu01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     CHU_0924 (ddlA)
    6.3.2.8  UDP-N-acetylmuramate---L-alanine ligase
     CHU_0924 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:chu01011]
 Precursor biosynthesis
  Amino acid ligase
   CHU_0924 (ddlA)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp_3 RimK ATP-grasp ATPgrasp_ST GARS_A Hepar_II_III_N
Other DBs
NCBI-ProteinID: ABG58203
UniProt: A0A6N4SPG5
Position
complement(1057615..1060308)
AA seq 897 aa
MRIGIIFGGQSREREISFAGGRTVYDNLNKDIFTTVPIFVDSLGQFILLDWQYIYKGTIR
DFYPPFEFLPKSIHGFQVYVESLGDLPKEERDAMIQKVGRKIEPSDLKELIDFAFLALHG
PYGEDGAIQGMLDWNNIPYSGSGILPSAIGINKYIQKKLVAQASFNGPNYVTYKKSTWLK
GADTKALLAHFESSVGFPFVVKAPSQGSSIGITVISERNEEKLKQALNRSFFLQEITAAD
WNTKTEHAKIKWVATLTDIRDGIGMPVNDVLQGKTIYHPEELLAHLNQSLSSKERVLLES
LDNEEEIIIESFIKGQEFSCIVIQDEDGNPIALPPTGIVKGNDFFDYRSKYLPGMSRKIT
PIDIPGEQVELIRSECCRLYSTLQFNVYARIDGFISPEGEVFLNDPNTTSGMMPSSFFFH
QAAEIGLNPSQFLTYIIRTSIQERIKDGKRSLRYKQLLATLDQAISSEKNSSKEKIKIAV
VMGGYSSERHISVESGRNIFEKLSSSTKYQPLPVFLTGSDEQHRLFILPINILLKDNADD
IREKVINFKGHHPIIEHIAKETESISSRYVSNAIKDPKEISYKELSELVDGVFIALHGRP
GEDGSMQKELEKYQLPYNGSGIQSSQITINKFETNRILREHGISVANHRMVYKQEWLDAG
EKLLSEIESGFIYPIIAKPSDDGCSSAVKKIKNRDELRAYTRLMFGEEAIQGSVSSSVLG
LKYNEEFPQKDYFLIEDLVSKGNAKHFLEVTGGLMTRFNDKGNVEYEIFEPSESLATGDV
LSLEEKFLAGEGQNITPARYTTNKADYEQVASEVRATLKRVAEVLNIQGYARIDAFVRVF
ENNRSETIIIEVNSLPGMTPATCIFHQTAINGYKPYDFIDNILTFGIEREKKKLAKI
NT seq 2694 nt   +upstreamnt  +downstreamnt
atgagaataggaatcatctttggtggacagtctagagaacgagaaatttcatttgctgga
ggaagaactgtttacgataatttaaataaagatattttcactaccgttcccatctttgtt
gatagccttggccagttcattttattagactggcaatatatctacaagggaaccattcgt
gatttctaccctccttttgaatttcttcctaaaagcattcatggctttcaggtctatgtt
gaatcacttggtgaccttccaaaagaagaacgggatgccatgattcaaaaagtaggcaga
aaaattgagccttctgacctgaaagaattaattgactttgccttccttgctttacatggt
ccttatggagaagatggtgccatacaaggtatgctggactggaataatattccctattca
ggttcaggcattctgccttcagctattggtatcaataaatacattcagaagaaattagta
gcacaagccagtttcaacggacctaactatgttacctacaaaaaatctacctggctaaaa
ggtgctgatacaaaagcactgcttgcacattttgaatcaagcgtaggttttccttttgtt
gtaaaagcaccgtcacaaggctcttccattggtattacggttatcagtgagcgaaatgaa
gaaaaattaaagcaagcgctaaaccgtagcttttttcttcaggaaattacagctgcagac
tggaacacaaaaacagaacatgcgaaaataaaatgggtggcaacccttaccgatatccgc
gatggtattggcatgcccgtaaatgatgtattacaaggcaaaaccatttatcatccggaa
gaattattagcacatttaaatcaatcgctttcttctaaagaacgtgttttattggaaagt
ttagataatgaggaagaaatcatcattgaatcctttattaaaggccaggaattctcctgc
attgttatacaggatgaagatggtaatccaatagcgctgcctcctacgggtattgttaaa
ggaaatgatttctttgattaccgttcaaaatatctgccgggcatgtcaagaaagatcaca
cctattgatattcctggcgaacaagttgaattgatccgcagcgaatgctgccgcttatat
tcaaccttacagttcaatgtatatgcacgtattgatggttttatttctcctgaaggagag
gtcttcttaaacgacccgaatacgacttctggtatgatgccatcgtccttcttttttcat
caggcagcagagatcggcttaaatccgtctcaattccttacctacattatccgtacgtct
attcaggagcgtattaaagacggcaaaagaagtttgcgctacaaacaattgctggcaaca
ctggatcaggcaatttcatctgaaaagaattcttccaaagaaaaaattaaaattgctgtg
gtaatgggtggctattcttctgaacgccacatctccgttgaaagcggaagaaatatcttt
gaaaaactttcctccagtacaaaataccagccgcttcctgtgttcttaacaggcagtgac
gagcagcaccgtttattcatcttaccgatcaatattttattgaaagacaatgcagatgat
atacgtgaaaaagtaatcaactttaaagggcaccacccgatcattgaacatattgcaaaa
gaaacggaatcgatcagcagccggtatgtgagcaatgcaattaaagatccgaaagagatt
tcctacaaagaactttctgagctggtagatggcgtcttcattgccctgcacggccggccg
ggagaagatggcagcatgcagaaagagcttgagaaatatcagttgccgtataacggttca
ggtatacaaagttctcagatcacgatcaataaatttgagacaaaccgcattcttcgggag
catggtatttctgttgcaaaccacagaatggtttacaagcaggaatggttagacgcaggc
gaaaaattgttatccgaaattgaatccggttttatatatcccatcattgctaaaccatct
gacgatggatgcagctctgcggttaaaaagataaaaaacagagacgagcttcgtgcctat
acccgattaatgtttggtgaagaagccattcagggatctgtcagttcttccgtattggga
ttgaaatataacgaagaatttccgcagaaagattatttcttaattgaagatctggtttct
aaaggcaatgcaaaacatttcctggaagttacgggcggattaatgacccgtttcaacgat
aaaggcaacgttgaatatgaaatatttgaaccttctgaatcgttggctaccggtgatgtt
ttatccctggaagaaaaattccttgccggtgaaggacagaacataaccccggcgcgttat
acaaccaacaaagcagattatgagcaagtggcttcagaagtacgtgcaacattaaaacgc
gtagctgaagtattgaatattcaggggtatgcacggatcgatgcgtttgtacgtgtcttt
gaaaacaatagatctgaaaccattatcattgaagtaaactcgctgccgggcatgacgcct
gcaacctgtatatttcaccagacggctattaatggatataagccatacgacttcattgat
aacattttaacatttggcatagaaagagaaaagaaaaaattagctaaaatataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (2)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (47)   

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