KEGG   Capra hircus (goat): 102169132
Entry
102169132         CDS       T02910                                 
Symbol
CHD3
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 3 isoform X1
  KO
K11642  chromodomain-helicase-DNA-binding protein 3 [EC:5.6.2.-]
Organism
chx  Capra hircus (goat)
Pathway
chx03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102169132 (CHD3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:chx03036]
    102169132 (CHD3)
Chromosome and associated proteins [BR:chx03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102169132 (CHD3)
  Chromatin remodeling factors
   NuRD complex
    102169132 (CHD3)
SSDB
Motif
Pfam: SNF2-rel_dom CHDCT2 CHDII_SANT-like Helicase_C CHDNT DUF1087 PHD Chromo HDA2-3 ResIII HMG_box DEAD PHD_2 AAA_22
Other DBs
NCBI-GeneID: 102169132
NCBI-ProteinID: XP_017920086
EnsemblRapid: ENSCHIG00000016737
Position
19:27305583..27330729
AA seq 2114 aa
MASPLRDEEEEEEEMVVSEEEDEEEEEGDEEEEEVEAADEDYEEDDDEGVLGRGPGHDRG
RDRHSPPGCHLFPPPPPPPPLPPPPPPPPPDKDDIRLLPSTLGVKKRKRGPKKQKENKPG
KPRKRKKLDSEEEFGSERDEYREKSESGGSEYGTGPGRKRRRKHREKKEKKTKRRKKGEG
EGGQKQVEQKSSATLLLTWGLEDVEHVFSEEDYHTLTNYKAFSQFMRPLIAKKNPKIPMS
KMMTILGAKWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSAAVSSATPIAPSGPPALP
PPPAADIQPPPIRRAKTKEGKGPGHKRRSKSPRVPDGRKKLRGKKMAPLKIKLGLLGGKR
KKGGSYVLQSDEGPEPEAEESDLDSGSVHSASGRPDGPIRTKKLKRGRPGRKKKKVLGCP
AVAGEEEIDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC
EKEGVQWEAKEEEEDYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCL
NPPLPDIPNGEWLCPRCTCPVLKGRVQKILHWRWGEPPVAVPAPQQADGNPDAPPPRPLQ
GRSEREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGK
SDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTW
EEDEMNIPEYEDHKQSYWRHRELIMGEDPAQPRKYKKKKKELQGDGPPSSPTNDPTVKYE
TQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGH
TKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKK
AFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYK
IDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPH
MLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMM
DLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFS
QMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGI
NLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMM
LTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNEAIARL
LDRNQDATEDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLR
HHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQ
SKRQLRNEKDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAVMRWGMPPQDAFTTQWLVRD
LRGKTEKEFKAYVSLFMRHLCEPGADGSETFADGVPREGLSRQQVLTRIGVMSLVKKKVQ
EFEHINGRWSMPELMPDPSADSKRSSRASSPTKTSPTTPEASAANSPCTSKPATPAPSEK
GDGIRTPLEKDEAENQEEKPEKNSRIGEKMETEADIPSPSPSLGERLEPRKMPLEDEVPG
VPGEMEPEPGYRGDREKSATESTPGERGEEKPMDGQEHRERPEGETGDLGKRAEDVKGER
ELRSGPPRDEPRSNGRREEKAEKPRFMFNIADGGFTELHTLWQNEERAAISSGKLNEIWH
RRHDYWLLAGIVLHGYARWQDIQNDAQFAIINEPFKTEANKGNFLEMKNKFLARRFKLLE
QALVIEEQLRRAAYLNLSQEPAHPAMALHARFAEAECLAESHQHLSKESLAGNKPANAVL
HKGKGRGGPARGRAHSAASEPAGGVAERHEGGRDPPASHAVPNTPHRSPPSDVRAQHPQP
AGQQGHGASPHTGLPPGSIRYTSGVRGGLQRRTRRGPGRRRRQLQPDASRVLHHSRHQRP
SSAGEEGEGNGGGTGGRRAGSEGAPNRGGDLYRRLTGSQACPSPRSRPRGRPPAQAPGPA
ANPPPSPPLGPPLG
NT seq 6345 nt   +upstreamnt  +downstreamnt
atggcttcccctctgagggacgaggaggaggaggaggaggagatggtggtgtcggaggag
gaagacgaggaggaagaagagggcgacgaggaggaggaggaggtggaggcggccgacgag
gactacgaggaggacgacgacgagggagtactcgggcgcgggccgggccacgaccggggc
cgcgaccgccacagcccccccggctgccacctcttcccgccgccgccgccgccgccgcca
ctgcccccgccgccgccgcccccgccgccagataaagatgacattcgactgctgccttca
acattgggcgtgaagaagagaaagcgaggacctaagaaacagaaggagaacaagccagga
aagccccggaaacgcaagaagcttgacagcgaggaggaatttggctctgagcgagacgag
taccgggagaagtcagagagtggaggcagtgaatatggaactggaccaggtcggaaacgg
agacggaagcaccgagaaaaaaaggagaagaagacaaagcggcggaaaaaaggggaggga
gagggggggcaaaagcaagtggaacagaagtcatcagcaaccctacttctgacctggggc
ctggaggacgtggaacatgtgttctccgaggaagattaccacacactcaccaactacaaa
gccttcagccaattcatgaggcccctgattgctaagaagaatcctaagatcccaatgtct
aagatgatgaccattctcggggccaagtggagagagttcagcgccaacaaccccttcaag
gggtcggcggctgctgtggcagcagcagcggcagctgcggcggcagctgtagctgagcag
gtgtcagccgctgtctcctcggccacccccatagcaccttccggaccccctgcccttcca
ccaccccctgctgctgatatccagcccccacccatccgaagagccaaaaccaaagagggc
aaaggtccaggccacaagcggcggagtaagagcccccgagtgcctgacggacgcaagaag
cttaggggaaagaagatggcaccactcaaaatcaagctagggctgctgggtggcaagaga
aagaagggcggctcgtatgttttgcagagtgacgagggccccgaaccggaggccgaggaa
tcagacctggacagcggcagtgtccacagtgcctcaggccgccccgatggccccatccgc
accaagaaactaaaacgaggccggccaggaaggaagaagaagaaggttctgggctgtccc
gctgtggctggggaggaggagattgacggctacgagacagatcatcaggattactgtgag
gtgtgccagcagggtggggagatcattctgtgtgacacctgccctcgtgcctaccacctc
gtctgccttgatcctgagcttgaccgggctcctgagggcaagtggagctgccctcactgt
gagaaggagggggtccagtgggaagccaaggaggaggaggaagactatgaagaggagggg
gaggaggaaggggagaaggaggaagaagatgaccacatggaatattgccgcgtgtgcaag
gacggcggggagctgctgtgctgcgacgcctgcatctcctcctaccacatccactgtcta
aaccccccgctgcccgacatccccaacggcgaatggctgtgtccccgatgcacctgtcct
gtgctgaaaggccgtgtgcagaagatcctgcactggcggtggggggagccacctgtggcc
gtgccagccccccagcaggcagacgggaatccggatgccccacctccacgacctcttcaa
ggcagatccgagcgagagttctttgtcaagtgggtgggcctgtcctactggcactgctcc
tgggccaaggagctgcagctggaaatcttccacttggtgatgtaccgaaactaccaacgg
aagaatgacatggatgagcccccacccctggactatggctctggtgaggacgacggcaag
agtgacaagcgcaaggtgaaggacccgcactatgctgagatggaagagaagtactatcgt
tttggcatcaagccagagtggatgaccgtccaccggatcatcaaccacagtgtggataaa
aaggggaattaccactatctagtgaaatggagggacttaccctatgaccagtctacatgg
gaggaagatgaaatgaacatccctgaatatgaagaccacaagcagagctactggagacac
cgagaactaattatgggggaggatcctgctcagccccgcaagtataagaagaagaagaag
gagctgcagggtgatgggcctcccagttctcctactaacgatcctacagtgaaatatgag
actcagccacgcttcatcacagccacaggaggcacactacacatgtatcagctggaggga
ttgaactggctacgcttctcatgggcccagggcactgataccattctggctgatgaaatg
gggctgggcaagaccatacaaaccatcgtcttcctctactcactctataaggagggccac
acaaagggtcccttcctggtgagtgccccgctgtccaccatcatcaactgggagcgggag
ttccagatgtgggcacccaagttctatgtagtaacatacacgggtgacaaggacagccga
gccatcattcgtgagaatgagttttcctttgaagacaacgccatcaaaggtggcaagaaa
gcttttaagatgaagagggaggcacaggtgaagttccatgttctcctgacatcatatgag
ctgatcaccattgatcaggcagctctcggctccatccgctgggcctgtctcgtggtggat
gaggcccatcggctcaagaacaaccagtccaagtttttcagggtcctcaatggctacaag
atagatcataagttgctgctgacagggactccattgcagaataatctggaggagctcttc
catctactgaacttcctcaccccagagaggtttaacaacctggagggcttcctggaggag
tttgctgacatatccaaagaagaccaaattaagaaacttcatgacttgctggggccacac
atgctgcggaggctcaaggcagatgtctttaagaacatgccagccaaaacagagctcatc
gttcgcgtggagctgagccccatgcagaagaaatactacaaatacatcctgacccgaaat
tttgaggccttgaattcacgaggtggtgggaaccaggtgtcgctgctgaacatcatgatg
gatcttaagaagtgctgcaaccatccgtacctctttcctgtggctgctatggagtccccc
aaacttcccagtggggcttatgagggtggggcacttattaaggcatctgggaagctcatg
ctgctgcagaagatgctgcgaaagctgaaggagcaaggacacagagtgctcatcttctcg
cagatgaccaaaatgttagacttactggaggacttcttagactatgaaggctacaagtat
gagcgcatcgatggcggcatcactggtgccctgaggcaggaggccattgaccgcttcaat
gctcctggggcccaacaattctgtttcctcctgtccacccgggccgggggcctgggcatc
aatctggccactgctgacactgtcatcatcttcgattcagactggaacccccataatgat
atccaggccttcagccgcgctcatcggatcggccaggccaacaaagtgatgatttaccgg
tttgtgactcgtgcctctgtggaagagcgaatcacacaggtggccaagagaaagatgatg
ctgacacatctggtggtgcggcccgggctgggctccaaggcgggctccatgtccaagcag
gagctggacgacatcctcaaatttggtactgaggagctatttaaggatgaaaacgagggt
gagaacaaggaggaggacagcagtgtgattcactatgacaacgaggccattgctcggctc
ttggaccggaaccaggatgcaactgaggacactgacgtacagaacatgaacgagtatctc
agctccttcaaggtggcccagtatgtggtgcgggaagaagacaagattgaggaaattgaa
cgagagatcatcaagcaggaagagaacgtcgaccccgactactgggagaagctgctgcgg
caccactatgagcaacagcaggaagacctggcgcggaacctcggcaagggcaagcgggtc
cgcaagcaggtcaactacaatgacgctgctcaggaggaccaagataatcagtcagaatac
tcagtgggatcagaagaggaggatgaagactttgatgagcgtcctgaaggacgtcgacag
tccaagaggcagcttcggaatgaaaaggataagccactgcctccactgctggctcgagtt
gggggcaacatcgaggtactaggattcaacacccgtcagcggaaggcctttctcaatgcg
gtgatgcgctggggcatgcccccgcaggacgccttcaccacccagtggctggtgcgggac
ctcagaggcaagactgagaaagagtttaaggcctatgtgtctttgttcatgcgccatctc
tgtgagcccggggcggacggctctgaaacctttgctgatggagtccctcgggaggggctg
agtcgccagcaagtgttgacccgcattggagtcatgtctctcgtcaagaaaaaggtacag
gagttcgagcacatcaatgggcgctggtctatgccagagctgatgcctgaccccagtgct
gactccaagcgctcctccagagcctcttctcctaccaaaacatctcccaccactcctgag
gcctcggctgcaaacagcccttgcacctcgaaacctgctactccagctcccagtgagaaa
ggagatggcataaggacacctctggagaaggatgaagcagaaaaccaggaggagaagcca
gaaaagaatagcaggattggggagaagatggagacagaggctgatatccccagcccatcc
ccatccctgggagagcggctagagccaaggaagatgcctctagaggatgaggtgccaggg
gtacctggagagatggagcctgaacctgggtaccggggggacagagagaagtcagccaca
gagtcgacgccaggagagaggggggaggagaagccgatggatggacaggaacacagggag
aggccggagggggagacaggggatttgggcaagagagcagaagatgtgaaaggggagcgg
gagcttcggtctgggcctcctcgagatgagccacggtccaatgggcgacgtgaggagaag
gcagagaaaccgcggttcatgttcaacattgcagatggtggcttcacagagcttcacacg
ttgtggcagaatgaggagcgggcggctatttcctccgggaaactcaacgagatctggcac
cgaagacacgactattggctcctggctgggattgtcctccatggatatgcacggtggcag
gacatccagaatgatgctcagtttgccattatcaatgagccatttaaaactgaagccaat
aaggggaactttctggagatgaaaaataaattcctggcccggagattcaagctcctggag
caggcgctggtgattgaggagcagctgcggcgggcggcctacctgaacctatcacaggag
ccggcgcaccccgccatggccctccacgcccgcttcgccgaggccgagtgcctggccgag
agccaccagcacctctccaaggagtcgctggcggggaacaagccggccaacgccgtcctg
cacaagggtaagggccgcggcggccccgcgcgggggagggcccacagcgctgcttctgaa
ccagctggaggagttgctgagcgacatgaaggcggacgtgacccgcctgccagccacgct
gtcccgaataccccccatcgcagcccgccttcagatgtccgagcgcagcatcctcagccg
gctggccagcaagggcacggagcctcaccccacaccggccttccccccgggtccatacgc
tacacctccggggtacggggcggccttcagcgccgcacccgtcggggccctggccgccgc
aggcgccaattacagccagatgccagcagggtccttcatcacagccgccaccaacggccc
tccagtgctggtgaagaaggagaaggaaatggtgggggcactggtggcagacgggctgga
tcggaaggagccccgaaccggggaggtgatctgtatagacgactgaccggatcccaggcc
tgcccttcacccaggtcccggcctcgaggtcgacccccagctcaggctccggggcctgct
gccaatcctccaccttccccaccccttgggccaccactgggctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (13)   
   RefSeq(nuc) (9)   
   GenBank (2)   
   EMBL (2)   
Protein domain (14)   
   Pfam (14)   
All databases (45)   

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