KEGG   Capra hircus (goat): 102185011
Entry
102185011         CDS       T02910                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
chx  Capra hircus (goat)
Pathway
chx04512  ECM-receptor interaction
chx04514  Cell adhesion molecules
chx04820  Cytoskeleton in muscle cells
chx05144  Malaria
chx05205  Proteoglycans in cancer
chx05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:chx00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102185011 (SDC1)
   04514 Cell adhesion molecules
    102185011 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102185011 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    102185011 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    102185011 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    102185011 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:chx04131]
    102185011 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:chx04090]
    102185011 (SDC1)
   00535 Proteoglycans [BR:chx00535]
    102185011 (SDC1)
Membrane trafficking [BR:chx04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    102185011 (SDC1)
CD molecules [BR:chx04090]
 Proteins
  102185011 (SDC1)
Proteoglycans [BR:chx00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   102185011 (SDC1)
SSDB
Motif
Pfam: Syndecan Romo1
Other DBs
NCBI-GeneID: 102185011
NCBI-ProteinID: XP_017911091
EnsemblRapid: ENSCHIG00000018782
UniProt: A0A452F6G6
Position
11:78349821..78374106
AA seq 312 aa
MRRAALWLWLCAMALRLQPALPHSVPINMPPEDQDGSGDDNDNFSGSGAGALPDITSSQT
PSTWKDLGPVTTTATAPEPTSPDAIATATTILPTGEQPEGGGAVLLAEVEPGLTAQEKEA
THPPSKTTLHPTTHSVSTARATMAPGPATSHPHRDVQPDHHETSAPTGRGRLEPHTPHTE
DGGPPATEKAAEEDPSTQIPVGEGSGEQDFTFDLSGENAAGAAVEPGSRNVAPGDPEATG
ATGASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGA
YQKPTKQEEFYA
NT seq 939 nt   +upstreamnt  +downstreamnt
atgaggcgcgcggcgctctggctgtggctctgcgcgatggcgctgcgcctgcagccggcc
ctcccgcacagtgtgcccataaacatgccccccgaagatcaggacggctctggggacgac
aatgacaacttctctggctcgggtgcaggtgctttgccggatatcacttcatcacaaacg
ccctccacctggaaggacctggggcccgtgacgaccacagccacggctccagagcccacc
agcccagatgccatcgccaccgccaccaccatcctgccaaccggagagcagcctgagggg
ggtggggcggtgctcctggcagaggtggagcctggccttaccgcccaggagaaggaggcc
acccacccacccagtaagaccacgctgcacccgaccactcacagcgtgtccacagccaga
gccaccatggccccgggacccgccacctcccatccccacagggacgtgcagcccgaccac
catgagacctcggctcccacaggccggggccgtctggagccgcacacgccccacacggag
gatggaggtcctcctgccactgagaaggcggctgaggaggacccctccacccagatccca
gtgggagagggctctggggagcaggacttcaccttcgacttgtccggggagaatgcagcc
ggggctgcagtggaacctggctcacggaacgtagccccaggggatcctgaggccacaggg
gctaccggggcttcgcagggccttctggaccggaaggaagtgctgggaggggtcattgct
ggaggcctcgtggggctcatctttgccgtgtgcctggtgggtttcatgctgtaccggatg
aagaagaaggacgaaggcagctactccttggaggagccaaaacaagccaacggcggggcc
taccagaagcccactaagcaggaggagttctatgcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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