KEGG   Capra hircus (goat): 102188069
Entry
102188069         CDS       T02910                                 
Symbol
SSU72
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
chx  Capra hircus (goat)
Pathway
chx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102188069 (SSU72)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chx03021]
    102188069 (SSU72)
   03019 Messenger RNA biogenesis [BR:chx03019]
    102188069 (SSU72)
Enzymes [BR:chx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     102188069 (SSU72)
Transcription machinery [BR:chx03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     102188069 (SSU72)
Messenger RNA biogenesis [BR:chx03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     102188069 (SSU72)
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 102188069
NCBI-ProteinID: XP_017916008
EnsemblRapid: ENSCHIG00000026529
Position
16:49552755..49577518
AA seq 227 aa
MTSGRGGRHLARAEAARLGGSPEAGVADGAAAAMPSSPLRVAVVCSSNQNRSMEAHNILS
KRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELYTQNGILHMLDR
NKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDLNSREQETCQPVHVINVDIQDNHEE
ATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY
NT seq 684 nt   +upstreamnt  +downstreamnt
atgacttccgggcgtggaggccgccatcttgctcgtgcggaagcggcgcggctgggtggg
agtcccgaagcgggagtcgcagacggtgcggctgccgccatgccgtcgtcgccactgcgg
gtggcggtggtgtgctcgagcaaccagaaccggagcatggaggcgcacaacatcctcagc
aaacgaggattcagcgtccggtcctttggaacaggaactcacgtgaagcttccaggacca
gcacctgacaaaccgaacgtttatgatttcaaaaccacatatgaccagatgtacaacgac
ctccttaggaaagacaaagaactctatacgcagaatggcattttacacatgctggacaga
aataagaggatcaagccccggccagaaaggttccagaactgcaaagacctgtttgacctg
atcctcacctgtgaagagcgagtgtacgaccaggtggtagaagatctgaattccagggag
caggagacctgccagcccgtgcatgtgatcaacgtggacatccaggacaaccatgaggag
gccacgctgggggcgttcctcatctgcgagctctgccagtgtatccagcacacggaggac
atggagaatgagatcgacgagctgctgcaggagttcgaggagaagagcggcaggaccttc
ctgcacaccgtctgcttctactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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