KEGG   Capra hircus (goat): 102190237
Entry
102190237         CDS       T02910                                 
Symbol
PSMC1
Name
(RefSeq) 26S protease regulatory subunit 4
  KO
K03062  26S proteasome regulatory subunit T2
Organism
chx  Capra hircus (goat)
Pathway
chx03050  Proteasome
chx05010  Alzheimer disease
chx05012  Parkinson disease
chx05014  Amyotrophic lateral sclerosis
chx05016  Huntington disease
chx05017  Spinocerebellar ataxia
chx05020  Prion disease
chx05022  Pathways of neurodegeneration - multiple diseases
chx05165  Human papillomavirus infection
chx05169  Epstein-Barr virus infection
chx05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    102190237 (PSMC1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    102190237 (PSMC1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    102190237 (PSMC1)
   05165 Human papillomavirus infection
    102190237 (PSMC1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    102190237 (PSMC1)
   05012 Parkinson disease
    102190237 (PSMC1)
   05014 Amyotrophic lateral sclerosis
    102190237 (PSMC1)
   05016 Huntington disease
    102190237 (PSMC1)
   05017 Spinocerebellar ataxia
    102190237 (PSMC1)
   05020 Prion disease
    102190237 (PSMC1)
   05022 Pathways of neurodegeneration - multiple diseases
    102190237 (PSMC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:chx03051]
    102190237 (PSMC1)
Proteasome [BR:chx03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     102190237 (PSMC1)
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_2 AAA_22 nSTAND3 DUF815 AAA_5 RuvB_N AAA_16 AAA_25 AAA_28 AAA_14 RNA_helicase AAA_3 ATPase IstB_IS21 TIP49 AAA_11 AAA_18 Mg_chelatase Prot_ATP_ID_OB_N AAA_7 AAA_33 Parvo_NS1 NB-ARC PhoH NACHT AAA_24 AAA_30 TsaE
Other DBs
NCBI-GeneID: 102190237
NCBI-ProteinID: XP_017909335
EnsemblRapid: ENSCHIG00000016963
Position
10:complement(1341698..1354253)
AA seq 440 aa
MGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgggtcaaagtcagagtggtggtcacggtcctggaggcggcaagaaggatgacaaggac
aagaaaaagaaatatgagccccctgtgccaactcgagttgggaagaagaagaagaagaca
aaggggccagatgctgccagcaagctgcccctggtgacacctcacactcagtgccggtta
aaactgctgaagctggagagaattaaagactaccttctcatggaggaagagttcatccgg
aatcaggagcaaatgaagcctttagaagaaaagcaggaggaggagaggtcaaaggtggac
gacctgcgggggacgccgatgtcggtggggaccctggaggaaatcatcgatgacaaccac
gccatcgtgtccacgtcggtgggctcggagcactacgtcagcatcctctcgttcgtggac
aaggacctgctggagcccggctgctccgtgctgctcaaccacaaggtgcacgcggtgatc
ggggtgctgatggacgacacggaccccttggtcacagtgatgaaggtggaaaaggcgccc
caggagacctacgccgacattggggggctggacaaccagatccaggagatcaaggagtct
gtggagcttcctctcactcatcctgaatattatgaagagatggggatcaagccccccaag
ggggtcattctctacggcccgcctggcacaggtaaaaccttattagccaaagcagtagcg
aaccagacctcggccactttcctgcgagtggttggctctgaacttattcagaagtacctg
ggtgacgggcccaaactcgttcgggaactgtttcgagtcgctgaagaacacgcaccatcc
atcgtctttattgatgaaattgatgctattgggacgaaaaggtacgactccaactcgggc
ggggagagagagattcagcgaacaatgctggagctgctgaaccagctggacgggtttgac
tcgcggggagacgtgaaagtcatcatggccacaaaccggatagagaccctggacccggcc
ctcatcagaccaggccgcatcgacaggaagatcgagttccccctgcccgacgagaagacc
aagaagcgcatctttcagatccacacgagcaggatgacactggccgacgacgtgaccctg
gacgacctgatcatggctaaagacgacctctctggtgccgacatcaaggcaatctgcaca
gaagctggtctgatggccctgagagagcgcaggatgaaagtgaccaacgaagacttcaag
aagtccaaggaaaacgttctttataaaaaacaggaaggcacccccgaggggctctatctc
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (31)   
   Pfam (31)   
All databases (58)   

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