KEGG   Citrus x clementina (clementine): CICLE_v10000078mg
Entry
CICLE_v10000078mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CICLE_v10000078mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cic03021]
    CICLE_v10000078mg
Enzymes [BR:cic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CICLE_v10000078mg
Transcription machinery [BR:cic03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     CICLE_v10000078mg
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 Pox_LP_H2 FtrD-like
Other DBs
NCBI-GeneID: 18041007
NCBI-ProteinID: XP_006432385
UniProt: V4T2Q0
Position
Unknown
AA seq 1149 aa
MGLMQVEESPKDEQLPDKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGI
RKIVRANDRIVSGIDPSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVN
IEYVQGSHTEKTTMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIK
GTEKVLLIQEQLSKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVK
KIPIMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVK
RSTFGSPPNDREGRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDD
KDYVGNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSIT
VGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQ
PSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELH
NPNSFLVIFNGLILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRV
CRPLVIADKGISRIKEHHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATP
DTTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLL
VYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVV
KKYTAINQKYANSTSDRILRPDRTGPGSERMQILDDDGLAAPGEIIKPNDVYINKESPLE
TRGSIMSPTGQTDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPEL
GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGV
SCGRFHYGSAFGEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIY
YQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERL
MVSSDPFEVQVCRVCGLLGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMNI
VPRLKLAEA
NT seq 3450 nt   +upstreamnt  +downstreamnt
atgggtttgatgcaagtagaagagtctcccaaagatgagcaattaccagacaagcaaaag
ctcgctgctcccgtgaaatctgtagtggataaattccaacttcttcctgagttcttgaag
gtcagagggctggtgaaacagcatttggactcattcaattactttgttaatactggtatt
aggaagattgttcgtgcaaatgatcgtattgtgtccggaattgatccaagtatattcctc
aggtttaaagatgttagaattggccagccgtctatgactgtggatggtgttagtgaaaaa
cttaatcctcacatgtgccgcttatctgatatgacctatgctgcgcctatattggtcaat
attgaatatgttcaaggaagtcataccgaaaagaccaccatggagaagaatgatgttgtc
attggaagaattcccatcatgttgcggagttgtcgctgtgtcttatatggaaaggatgaa
gctgagctggcaagacttggtgagtgccctcttgatcctggtggatatttcatcattaaa
ggaactgagaaggtgctattaatacaagaacaactttcgaagaacagagtaattattgac
actgacaagaagggcaatataaatgcatctgttacaagtagcacagagacggtgaaaagc
aaaacagttatccaaatggagaaggggaagatgtatttacttcttaatcaatttgtgaaa
aagattcctatcatggttgtaatgaaggctatggggatggaaagtgatcaagaggttgtt
cagatggttggaagagatcctcgatatagtgccttacttttgccttcaattgaggaatgt
gcaaacctggatatatatacacaagagaaagcgttggagtatcttgagggaaaggtgaaa
aggtctacatttggtagtccaccaaacgatagggaaggaagagctttttctattcttcga
gatgtgtttcttgccaatgtccctgtgcataacaataacttccgtccaaaatgtttttat
gttgcggtcatgttgagaagaatggtggaggcaatgttaaataaggatgcaatggatgac
aaggattatgtggggaataaacggctggagttatcaggccaattagtttcattgcttttt
gaggatttgttcaagacaatgattagtgaggttcagaagacagtagatatcatcctatca
aagcctagccggtctagccgatttgatctttctcaatttatagttagagacagtatcact
gttggtcttgaaaggaccctttctactggcaactttgacgtcaagcggttcaaaatgcac
cggaaaggcatgacgcaggtgctggctaggctatcattcattgggactctgggccacatg
actagagtatcgccacaatttgaaaaatctaggaaagtaagtggacctagagcattgcaa
cccagccagtggggtatgctttgtccatgtgatactccagaaggtgaagcttgtggactg
gttaaaaaccttgctcttatgactcatgtcacaactgatgaagaggaaggtccattaatt
tctttgtgctattgtttgggagttgaggatttggaacttctctctggagaagagcttcac
aatccaaattcatttctggttatatttaatgggcttattcttggcaagcataggaggcct
aagtgttttgctgatgtaatgagaaagctgcgtagagctggcaaaattggcgagtttgtt
agtgtctttgtaaatgagaagcagcgttgtgtttacattgcttctgatggaggccgtgtt
tgtcgtccacttgtcattgctgacaagggcatatcaaggatcaaagaacaccatatgaag
gagttgtcggatggagtccgcagctttgatgactttttacgtgagggattgatcgagtat
ctcgatgttaatgaggaaaataatgctctgatagctttatatgaaggagatgctacacct
gatacaacccatattgagatagagcctttcacaatcctaggtgttattgctgggctaatc
ccatatcctcatcataatcaatcaccaagaaatacctatcagtgtgcaatggggaagcaa
gctatgggaaatatagcatttaatcaattgtgccggatggactcattgctttaccttttg
gtgtatcctcaacggcctttactgacaacaaggacaatcgaactggtcggatatgacaag
cttggagcagggcagaatgcaactgttgctgtgatgagttatagtggctatgacatagag
gatgcaatagtcatgaacaaatcatctctagatcgtggttttggtcgctgtattgttgtg
aaaaagtatacagccatcaatcagaagtatgcaaatagtacatcggacaggatactaagg
ccagatagaacaggtcctggttctgaaaggatgcagattttggatgatgatggacttgct
gctcctggggaaattattaaaccgaatgatgtttatatcaataaagagtcccctttggaa
accagaggttcaatcatgtctccaacaggacaaacagatagtagatataggtccgccaga
caaacttacaagggtccggacggggagacctgtgtagtggatagagttgctctttgttct
gataagaatggcgatttatgtatcaagtttttaattcgccatactcgtagaccagagctt
ggtgataagttcagtagcagacatgggcagaaaggtgtctgtggaaccatagttcagcag
gaagattttccattttctgaacgtggcatttgtcctgatttgatcatgaatcctcatgga
tttccaagtcggatgacagtaggtaaaatgatcgagcttttagggggaaaggctggagtt
tcgtgtggtaggttccattatggaagtgcctttggagaaccaagtggccatgcagacaca
gttgaatctataagtgaaacacttgtgaagcatggctttagctacaatggcaaggacatg
atttattcaggtatcactggatgccctctgcaggcttacattttcatggggccaatttac
taccagaagttaaagcatatggtcctggataaaatgcatgctcgaggaagtggaccccgt
gtcatgctaactcgacaacccactgaagggagagcacggaatggaggacttcgagttgga
gaaatggaacgtgattgtttgattgcttatggagctagcatgttgatttttgagcgccta
atggtttccagtgatccttttgaagttcaggtttgtagagtgtgtggtctgttgggctat
tacaaccataagctgaaagctgggatttgttctacttgtaaaaatggcaataatatttct
agcatgaaactgccatatgcatgcaagctcctgatccaggaactccaatcaatgaatatt
gttcctcgcttgaaactggccgaggcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (9)   
   Pfam (9)   
All databases (25)   

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