KEGG   Citrus x clementina (clementine): CICLE_v10001491mg
Entry
CICLE_v10001491mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
cic  Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:cic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cic03016]
    CICLE_v10001491mg
Enzymes [BR:cic01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     CICLE_v10001491mg
Transfer RNA biogenesis [BR:cic03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CICLE_v10001491mg
 Prokaryotic type
    CICLE_v10001491mg
SSDB
Motif
Pfam: PseudoU_synth_1 CENP-B_dimeris
Other DBs
NCBI-GeneID: 18042225
NCBI-ProteinID: XP_006431657
UniProt: V4SVU1
Position
Unknown
AA seq 382 aa
MTEFAKRISECSEQASKIPEEKEEDHQNDSVEEEEEYPEEVPETRTVTEVMSTNKRIQRY
LIAVEYIGTRFSGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRTDAGVHAASNVCHV
DVERISKRKPGEVLPPHDSSVVRRAVNHFLQSEGDIMVTDVRCVPSDFHARFRAQERTYF
YRILSGPEPLSVFEKDRAWHVTEELDLHAMQEACKVLVGCHDFSSFRASGCQANSPIRTL
DELHVSEVVSTALFSSINQDSPVLSSIDNSIKLGMPNGGSNVFGIRKKHRSYEVIARARS
FLYHQVRLIVGVLKAVGTGELTVSDVERILKAKTVTAASPMAPACGLSLGFVKYDLPEDD
QTDAAESLETCPDPVSRKRRLQ
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgaccgagtttgcaaagcgcatttctgaatgttctgaacaagcttcgaaaataccagaa
gaaaaagaagaagatcatcaaaacgacagcgttgaggaagaagaagagtacccagaagaa
gttccagaaacaagaacagttactgaagtcatgagcacgaataaacgaattcaacgttac
ttgatagccgttgagtatattgggactcgcttctcggggtcccagaagcagctcaattgc
cgcactgttgttggcgtgcttgaggaggcatttcataaatttattgggcagccagtttca
atctctctctccagtcgaacagatgctggagtacatgctgcatcaaatgtttgccatgta
gacgttgaacgcataagcaaaaggaagcctggggaagtgctaccacctcatgactcttct
gtggttaggagagcagtgaatcattttttacagtctgaaggagatatcatggttaccgat
gttcgatgtgttccatctgacttccatgcaagatttagagctcaagaacgaacgtacttt
tatcgcatactgtctgggccagagcctttgtctgtttttgagaaagatagggcttggcat
gtaactgaggagttagatcttcatgctatgcaggaagcatgcaaagttcttgttggatgt
catgattttagttccttcagggcatcaggttgccaggccaactccccaattagaacttta
gatgagctgcatgtttctgaggtggtatccactgcacttttctcatcgattaatcaagat
tcgcctgtgcttagttcaattgacaatagcattaaattagggatgcctaatggtggaagt
aatgtatttggcataaggaaaaaacatcgctcctacgaggttatagcccgtgcgcgttct
tttctttaccaccaggtgagactaattgtcggggttctaaaagctgtgggcaccggagaa
ttgaccgtttctgatgttgaaagaatcctaaaagcaaagacggtgactgctgcgagtcct
atggcccctgcatgcggcctatcccttggctttgtgaaatatgatctgccggaagatgat
caaacagatgctgcggaatctttagaaacatgtccggatccagtgagcaggaagagacgt
ctgcagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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