KEGG   Citrus x clementina (clementine): CICLE_v10002637mg
Entry
CICLE_v10002637mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K12189  ESCRT-II complex subunit VPS25
Organism
cic  Citrus x clementina (clementine)
Pathway
cic04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CICLE_v10002637mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cic04131]
    CICLE_v10002637mg
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cic04147]
    CICLE_v10002637mg
Membrane trafficking [BR:cic04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    CICLE_v10002637mg
Exosome [BR:cic04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   CICLE_v10002637mg
  Exosomal proteins of colorectal cancer cells
   CICLE_v10002637mg
SSDB
Motif
Pfam: ESCRT-II GntR
Other DBs
NCBI-GeneID: 18042651
NCBI-ProteinID: XP_006432680
UniProt: V4T3E3
Position
Unknown
AA seq 180 aa
MMQKLGDFKLPAFFNYPPYFTLQPVRDTREKQIQLWKELILDYCRTQKVFLILLEEEFPL
FSNPVIERSLNNEARETFLSALVSEGRAEWLDKGHRKCLILWHRIQDWADIILGFVKDNG
LEDSVMTVEEIRLGIESRGTELHGMDRTILMRALKLLEHKGKVAIFKGTSADDEGVKFSV
NT seq 543 nt   +upstreamnt  +downstreamnt
atgatgcagaaattgggagattttaagctccccgcattcttcaattaccctccatacttc
acactgcagccggttagggacactcgagaaaagcagatacagctttggaaggaacttatt
cttgattactgtaggacccaaaaagtatttttgattctacttgaagaagaatttcctctc
ttctcaaatccagtgattgaacgatctcttaataatgaagctagagaaacattcctgtct
gctttagtgtcagaaggtcgggcagagtggttggataaaggacataggaaatgccttatc
ctttggcaccggattcaagattgggctgacattattttaggctttgtaaaagacaatggg
ttggaggatagtgttatgactgtggaggaaatacgtttagggattgaatctcgagggaca
gagcttcatgggatggaccgcacaattttaatgcgagcgttgaaactacttgaacacaaa
gggaaggttgcaatatttaaagggacatcagctgatgatgaaggcgtgaaattctctgtg
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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