KEGG   Citrus x clementina (clementine): CICLE_v10007282mg
Entry
CICLE_v10007282mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03030  DNA replication
cic03410  Base excision repair
cic03420  Nucleotide excision repair
cic03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CICLE_v10007282mg
   03410 Base excision repair
    CICLE_v10007282mg
   03420 Nucleotide excision repair
    CICLE_v10007282mg
   03440 Homologous recombination
    CICLE_v10007282mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cic03032]
    CICLE_v10007282mg
   03400 DNA repair and recombination proteins [BR:cic03400]
    CICLE_v10007282mg
Enzymes [BR:cic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CICLE_v10007282mg
DNA replication proteins [BR:cic03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CICLE_v10007282mg
DNA repair and recombination proteins [BR:cic03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CICLE_v10007282mg
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CICLE_v10007282mg
SSDB
Motif
Pfam: DNA_pol_A DNA_pol_A_exo1
Other DBs
NCBI-GeneID: 18055242
NCBI-ProteinID: XP_006452242
UniProt: V4UH82
Position
Unknown
AA seq 1043 aa
MGVSTNLTTRKWSPCSSPNVPLTSFKRREGCITNTTFPNIMMSSSFPRFYSSFNNARRFP
IKKYAYRLSVGASSAKMVPFCQDLNSFEGNYSSKGTFDLPKIDEKREKLNGKQFLEFASY
YRPNPSIFSNETFSAKNTIHSSRGWMTETTRLHVMKEVESCQTNTESLRDEKEDAKAQDR
KRAAISTVINILESKHNRSFTSSKTECLQDSSFYSPITSSKQQHYFQKFNQQKKPIIKGL
ADLRNGAVGGHPKNHPGSVMAVTKQVTGSEEKSEDFVNDQIPLDKKTNMECLRYEKEVAE
YQERKGATVLTVPNLSDFRNSEIECFEDGSSYSPPPKLVGSKRSNQKNPKNDAAEGTGQN
KKALENENSEKIEILRSKLASFYSNVMVVDNVSAAKKVVWMLTNKYKHLVHACDTEVAKI
DVKQETPVDHGKVICFSIYSGPEADFGNGKSCIWVDLLDGGGRDILNEFAPFFEDPSIKK
VWHNYSFDNHVLENYGLKVSGFHADTMHMARLWDSSRRTEGGYSLEALTGDRKVMSEDKK
AYQKDMSKDNTDEGFMGKISMKDIFGRRKLKKDGSAGKISTIAPVEELQREERELWISYS
AFDSINTLKLYKSLKKKLLEMSWKLDGKPVPGKSMFDFYQEYWQPFGEILVKMETEGMLV
DREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMNVGSDTQLRQLLFGGKPNSKDDS
ESLPTERIFKVPNTEGVIAEGKKTPSKFRNITLRSIGVDLPTEIYTATGWPSVGGDALKT
LARNISAEYDCVDGAHDLDDSGCTEETEYKGAVASNNKIFATEQEAREACDAISALCEVC
SIDSLISNFILPLQGSNVSGKNGRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQ
AFIAAPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMYQHIRNAVET
GQVLLEWHGEDKPPVPLLKDAFASERRKAKMLNFSIAYGKTPVGLARDWKVFLWRKRRKQ
LISGIMKDKKFLLGKKLEKKNPA
NT seq 3132 nt   +upstreamnt  +downstreamnt
atgggagtctccacgaatctcaccaccagaaagtggtctccttgctcctctcctaatgtc
cctctcacttcttttaaaaggagagaaggctgcataaccaacactacctttcccaacatt
atgatgtcaagtagttttccccgattttatagttcttttaacaatgctaggagatttccc
attaaaaaatatgcttatagactttcggtgggtgcttcgtcagctaagatggtccctttc
tgccaagatctcaacagttttgaaggaaactactcctcgaaaggaacttttgatctgcca
aaaatagatgaaaaaagagaaaaactaaacggaaaacaatttctggagtttgcatcctac
tatcgtcctaatccttccattttcagcaatgaaacattttctgcaaaaaataccatccac
agttcgagagggtggatgacagaaacgaccagactgcatgtaatgaaagaagtagaatct
tgtcaaacaaatacagagagcttgagagatgagaaggaagatgcaaaagctcaagataga
aaaagagctgccatttctactgttatcaacatactggagtccaagcacaacagatcattt
acttcatcaaagactgagtgcttgcaagacagtagtttctattctccaatcacgagttct
aagcaacaacattattttcagaaatttaaccagcagaagaagcccatcattaagggacta
gcagatctcagaaatggtgcagtaggtggtcatcctaagaatcatcctggatctgtgatg
gctgttactaaacaagttactggcagtgaagaaaaaagcgaagactttgtgaatgatcaa
atacccttggacaagaagactaatatggagtgcttgcgatatgaaaaggaagttgcagaa
tatcaagagagaaaaggagccactgttttgacagttcccaacttgtcagatttcaggaac
tcagagattgagtgctttgaagatggtagttcctattcacctcctccaaaactagttggt
tctaagcgaagtaatcaaaagaatcctaagaatgatgctgcagaaggtactggccagaac
aaaaaggctttagaaaatgaaaatagtgaaaaaattgagattcttcgcagtaaacttgct
agcttctacagcaatgttatggttgttgataatgtttctgccgcaaagaaggttgtatgg
atgcttacaaacaaatataagcatcttgtccatgcatgtgatactgaggtggccaaaatt
gatgtgaagcaagagacacctgttgatcatggaaaagtgatatgcttcagtatttattct
ggaccagaagcagattttggaaatgggaagtcctgcatctgggttgatcttcttgatggt
ggtggcagggacattttgaatgaatttgctccattttttgaggatccatccatcaaaaag
gtttggcataactatagctttgataaccatgtccttgagaactatgggcttaaggtttct
ggttttcatgctgacacaatgcatatggcacggctttgggattcatcgagacgcacagag
ggtgggtacagtcttgaagcacttacaggtgatcggaaagtcatgtctgaggataagaaa
gcttatcagaaagacatgtctaaggacaacacagatgagggtttcatgggcaaaatatca
atgaaagatatctttggcaggagaaagttgaaaaaggatggatctgctggcaaaataagc
accattgctcctgttgaagagcttcaaagagaggagcgagagttgtggatctcttattct
gcatttgattcaataaacacactgaagctttataagagcttgaaaaaaaagcttttagaa
atgtcatggaaacttgatgggaaaccagttccaggaaaatccatgtttgacttttatcag
gaatactggcaaccattcggtgagattctagttaaaatggaaactgaggggatgttggtg
gatcgagaatatctttctgagattgagaaggtggccagagcagagcaagaagctgccgtt
aacaggttccgaaaatgggcatctaagcattgtcctgatgctaagtatatgaacgtggga
agtgacacacaactgcgccagcttttatttggtggcaagcctaacagcaaggatgactca
gagagtcttccaactgagagaattttcaaagttcccaacactgaaggagtgattgcagaa
ggcaagaagactccctcaaaatttcgcaatatcacgttgcgcagcattggcgttgatctg
ccaactgagatatacacggccactggttggccctctgttggtggagacgctttaaagacc
ttagctaggaacatttctgcagagtatgattgtgtggatggggctcatgacttggatgat
tctggatgtacagaagagacagaatacaagggtgcagttgcatcaaataacaagatattt
gcaacagagcaggaggcaagggaagcttgtgatgccatttctgctttatgtgaagtttgc
tctattgactccttgatatccaacttcatccttcccttgcaggggagtaatgtttcaggc
aagaatggacgtgttcattgttcgttaaatatcaacacagaaactgggcgcttgtcagca
aggaggccaaatttgcagaatcaacctgctttggagaaggaccggtataagatccgtcag
gcattcatagctgcacctggaaattctcttattgttgctgattacgggcagctggaactt
aggattcttgcacatctcgccaattgtaagagcatgttggatgccttcaaagctggtgga
gatttccattcaaggactgcaatgaatatgtatcagcatatacgtaatgctgttgaaaca
gggcaagtgctgcttgaatggcatggtgaagataaaccccctgttccattattgaaggat
gcctttgcttctgaaagaagaaaagctaagatgcttaacttttctattgcgtatggaaaa
actcctgtgggccttgctcgggattggaaggtgtttctgtggaggaagcgaagaaaacag
ttgatctctggtataatgaaagacaagaagttcttacttggcaagaagctcgaaaaaaag
aatcccgcatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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