KEGG   Citrus x clementina (clementine): CICLE_v10007478mg
Entry
CICLE_v10007478mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K11836  ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
cic  Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:cic00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cic01002]
    CICLE_v10007478mg
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cic04121]
    CICLE_v10007478mg
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cic04147]
    CICLE_v10007478mg
Enzymes [BR:cic01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     CICLE_v10007478mg
Peptidases and inhibitors [BR:cic01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   CICLE_v10007478mg
Ubiquitin system [BR:cic04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    CICLE_v10007478mg
Exosome [BR:cic04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CICLE_v10007478mg
SSDB
Motif
Pfam: UCH zf-UBP_var UBA zf-UBP UCH_1 UBA_4
Other DBs
NCBI-GeneID: 18054328
NCBI-ProteinID: XP_006452017
UniProt: V4UGQ0
Position
Unknown
AA seq 809 aa
MNPMDLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNF
EKTGNPVYLHIKQTRKLVAPEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILPEYVT
LSYPSVELPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGVIIPPS
GWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGTITSDL
EGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESG
QDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADPTVD
LNMQLTKLAHGLLSGKYSVPAQEKDAAANAATTTDTKQEGIPPRMFKAVIAASHPEFSSM
RQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISCPSGKVAYNRRLDYILSLG
IPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFSAPEELPDFYST
ALKAKTTATKSAGLTSFPDYLVLHMRKFVMEAGWVPKKLDVYIDVPDIIDISHMRSKGLQ
PGEELLPEGGPEDEVQSNKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLL
SHMDDPDIDMPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFNN
PDASTSSDMDAATSSTAQTPADAGLPDGGGKYRLFGIVSHIGTSTQCGHYVAHILKDGRW
AIFNDNKVGASVDPPKEMGYLYFFERLNS
NT seq 2430 nt   +upstreamnt  +downstreamnt
atgaaccctatggacttgctccgatctaatctctctcgggttcggatccccgaaccgact
aatcgtatcttcaaacaagaatgctgcgtctccttcgacactccgagatctgaaggtggg
ttgtttgtcgacctgaattcatttcttgcttatgggaaggaccatgttggttggaacttt
gagaagactgggaaccctgtttatttacatattaagcaaacgagaaagctggtggctcct
gaagataggccttcgaagaaaccaactctcttggctataggtgttgaggggggatttgac
aacaatgaagccgaatatgatgagactcacagtatagtcatattgcctgaatatgttact
ctttcatacccttctgtggagttgccagagaaggtaagattggcagttgatgcgatttta
atggctgagggtgccgagcgaaaagagcaagttgctgcctggacagctgataagaagcaa
accagtgcatatgcaatgaatttgcagcagatagacaatggtgttatcatcccgccgtct
ggttggaaatgtgctaagtgtgacaaaagggataacctctggctgaatcttactgatgga
atgatactgtgtggaaggagaaattgggatggaactggtggcaataaccatgctgttgaa
cactacaaggagacaggctaccctcttgctgtaaagcttgggacaattacttctgacctg
gaaggagcagatgttttctcctatccagaggatgatagtgttgtggatccacttttagct
cagcatctggctttttttggcattgacttttcatcattacagaagacggaaatgacaacc
gctgaaagagaacttgaccaaaataccaactttgactggaatcgcattcaagaaagtgga
caggatgtagaaccactttttggacccggatatacaggacttgtaaatcttggaaacagc
tgctacttggcagcaactatgcaagttatgttctcaacacatgccttctgcacacgttac
tacacgcaggagccattaaaagctgcttttgaggcagcacctgctgatccgactgtggac
ctaaatatgcagttgacaaagctggcacatggtttgctgtctggaaaatactctgttcca
gcacaggagaaagatgctgctgccaatgctgctaccacaacggacacaaaacaggaagga
atacctcctcgtatgtttaaagcagtaattgctgccagccatcccgaattctcttccatg
agacagcaggacgctttggaattctttctccattttgttgaccaagttgaacgtgttcat
tctggaaaacccgaagtggatcccacaaagagtttcaagtttggcattgaagaacgtatc
tcatgtccgtccggcaaggttgcatataatagaaggcttgattacattctttctttgggt
attcctctggatgaagctaccaataaagaagaactggcagcattccagaaattgaaaatg
gaaaggatttcagaagggaaggatgtaactaatgaggagattgttcgcccgagggtacct
ctagaagcatgcctatcaactttttcagctccagaggagcttcctgacttttacagcact
gccttgaaagctaagacaacagccaccaagtctgctggtttgacttcattccctgattat
ttggtgttgcacatgcggaaatttgtgatggaggcaggctgggttcccaagaagcttgat
gtttatatagatgttccagatatcattgatataagtcacatgcgcagcaagggccttcag
cctggggaggagctgttaccagagggagggcctgaggatgaggtgcagtcaaataagcct
gttgccaacaaggatattgtttcccagcttgtgtccatggggtttaaccatcttcattgt
gagaaagcggctgtgaatacctcaaatgctggagtagaggaggcaatgaattggttactt
tctcatatggatgatccagatatagatatgcctctttcccaagagacacaatgtgcagca
attgaccaatcaaaagttgagactttgctctcatttggtttctcagaagaagttgctagg
aatgcattgaaggcatcgggtggtgacattgaaaaagcaacagattggatatttaacaat
cctgatgcttctacttcctcggatatggatgctgctacttcaagcacagcacaaactcca
gctgacgctggtcttccagatggaggagggaaataccggctttttggaatagtgagccat
attggaacctctacacaatgtggccactatgttgctcatatcttaaaggatggtagatgg
gctattttcaacgataacaaggttggagcttctgttgatccacctaaagagatggggtat
ttgtatttctttgaaaggcttaacagctaa

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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