KEGG   Citrus x clementina (clementine): CICLE_v10008107mg
Entry
CICLE_v10008107mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K01883  cysteinyl-tRNA synthetase [EC:6.1.1.16]
Organism
cic  Citrus x clementina (clementine)
Pathway
cic00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CICLE_v10008107mg
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cic01007]
    CICLE_v10008107mg
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cic03016]
    CICLE_v10008107mg
Enzymes [BR:cic01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.16  cysteine---tRNA ligase
     CICLE_v10008107mg
Amino acid related enzymes [BR:cic01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   CICLE_v10008107mg
Transfer RNA biogenesis [BR:cic03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    CICLE_v10008107mg
 Prokaryotic type
    CICLE_v10008107mg
SSDB
Motif
Pfam: tRNA-synt_1e tRNA-synt_1g tRNA-synt_1 tRNA-synt_1f DALR_2
Other DBs
NCBI-GeneID: 18054467
NCBI-ProteinID: XP_006450372
UniProt: V4UC43
Position
Unknown
AA seq 493 aa
MSRKRELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLRHLGYEVCYVRNF
TDVDDKIIARANELGEDPISLSRRYCEEFHQDMVDLHCLPPSVEPRVSDHMPHIIDMITQ
ILDNGFAYRVDGDVYFSVDKFPEYGQLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAK
EGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACNN
SHISYWIHNGFVTIDSEKMSKSLGNFFTIRQVMELYHPLALRLFLIGTHYRSPINYSVVQ
LESASERIFYIYQTLHDCEKALSLLDAAALKDSIPPETVTSINKFHNDFLASMSDDLHTT
VVLAALSDPLKTINDLLHTRKGKKQAMRLESLAALEKTIRNVLTVLGLMSTGYSEVLLQL
REKALKRANLTEDQVLQRIEDRTVARKNKEYEKSDAIRKDLAAVGIALMDSPVGTTWRPA
LPLALQEQAVATS
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgagtagaaaaagggagctctttaagcccaaagttgagggtaaagttggaatgtacgtt
tgtggtgtcactgcttacgatctaagccatattggtcatgctcgtgtttatgtaaccttt
gatgttctttacagataccttaggcatttgggatatgaagtatgttatgttcgaaatttc
accgatgtcgatgacaagataattgctcgggcgaatgaattgggggaagatccgataagt
ttgagtagacgatactgtgaggagttccaccaggatatggttgatcttcattgcttgcct
ccatctgtagaacctcgtgtttcagatcacatgccccatatcatcgatatgatcacacag
attctggataatgggtttgcttatagagttgatggagatgtttacttctctgtagacaaa
ttcccagaatatggacaattgtctgggagaaagttagaagataatcgagctggtgagcgg
gttgccgtggactcgagaaagaaaaatcctgctgattttgctttgtggaagtctgcaaag
gagggggagcccttttgggagagtccatggggtcccggaagacctggatggcatattgag
tgcagtgccatgagtgctgcttatctaggtcactcttttgacatacacggtggagggatg
gaccttgtgtttccccaccatgaaaatgaaattgctcagagttgtgctgcatgtaacaat
agtcatataagctattggatacataacgggttcgtaaccattgactctgagaagatgtcc
aaatcccttggaaacttcttcacaatccggcaggttatggaactttaccatccactagct
ttgagacttttcttaattgggacccactatcgatctcccattaactattctgttgtacaa
cttgaaagtgcttctgaacgtattttctacatctatcagacattacatgattgcgaaaaa
gctctgagcctgcttgatgcagctgcattgaaggattcgatccctcctgaaactgtcact
agcatcaacaaattccataatgatttcctggcctcaatgtcagatgatcttcacactact
gttgttttggctgcattatctgacccattgaaaaccatcaatgatctgctacatactcgg
aaggggaagaagcaagcaatgcgactagaatctcttgcagctttggaaaagacaatcagg
aatgttctaactgtcttaggattgatgtcgacaggttactctgaggttttgctgcagctc
agggaaaaggcattaaagcgtgccaatttaaccgaagatcaagttttgcaaagaattgaa
gatcggactgtggcaagaaaaaacaaagaatatgaaaaatctgatgcaattaggaaagat
ttagctgctgtgggtattgctcttatggacagtccagtgggcacaacttggagaccggct
cttcctcttgcacttcaagagcaggcagttgctacaagttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

Download RDF
DBGET integrated database retrieval system