KEGG   Citrus x clementina (clementine): CICLE_v100187642m
Entry
CICLE_v100187642m CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K14290  exportin-1
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03008  Ribosome biogenesis in eukaryotes
cic03013  Nucleocytoplasmic transport
cic03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CICLE_v100187642m
   03008 Ribosome biogenesis in eukaryotes
    CICLE_v100187642m
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    CICLE_v100187642m
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cic03019]
    CICLE_v100187642m
   03009 Ribosome biogenesis [BR:cic03009]
    CICLE_v100187642m
   03016 Transfer RNA biogenesis [BR:cic03016]
    CICLE_v100187642m
   03036 Chromosome and associated proteins [BR:cic03036]
    CICLE_v100187642m
Messenger RNA biogenesis [BR:cic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     CICLE_v100187642m
Ribosome biogenesis [BR:cic03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    CICLE_v100187642m
  Pre-60S particles
    CICLE_v100187642m
Transfer RNA biogenesis [BR:cic03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    CICLE_v100187642m
Chromosome and associated proteins [BR:cic03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     CICLE_v100187642m
SSDB
Motif
Pfam: CRM1_C CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat Adaptin_N DUF3385
Other DBs
NCBI-GeneID: 18049743
NCBI-ProteinID: XP_006443178
UniProt: V4T804
Position
Unknown
AA seq 754 aa
FHIRVLESTQENISALLMGLEYLINISYVDETEVFKVCLDYWNSFVLELFDAHNNLENPA
VTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVPLSKLRMLMICRMAKPEEVLIVEDENG
NIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEKQMLKKLSKQLSGEDWTWNNLNTLC
WAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTKGKDNKAVIASNIMYVVGQYPRFLRAH
WKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVIVQVGENEPFVSELLSGL
ATTVADLEPHQIHTFYESVGHMIQAESDVQKREEYLQRLMLLPNQKWSEIIAQARQSVDF
LKDQDVIRTVLNILQTNTSVASALGTFFLSQISVIFLDMLNVYKMYSELISSSISSGGPF
ASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARES
EVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATH
CFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNFQASEFCNQFYRTYF
VTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGLLTEPLWDAATIPYPYPNNAMFV
REYTIKLLGTSFPNMTAAEVTQFVDGLLESRNDLSTFKNHIRDFLVQSKEFSAQDNKDLY
AEEAAAQRERERQRMLSIPGLIAPNEIQDEMVDS
NT seq 2265 nt   +upstreamnt  +downstreamnt
tttcatatcagagtgctcgaatccactcaagaaaatataagtgcattgctgatgggtctt
gaatatctcattaatatatcatatgtggatgaaacagaggtttttaaggtttgcttggat
tattggaactcttttgttttggagctttttgatgcgcacaataatctggaaaatcctgct
gtgacagcaaacatgatgggactaccgatgcctttgcttccaagtgttgtcgatggtatt
ggggcacagcttctgcaacggcggcagctttatgctgttccattgtccaagctgagaatg
ctaatgatctgtcgtatggctaagcctgaagaggtcctgatagttgaagatgaaaatggg
aatattgtccgcgaaaccatgaaggacaacgatgttcttgttcaatataagattatgagg
gagacattaatctacttgtcacaccttgaccatgaagacactgaaaagcagatgctaaaa
aagttaagtaaacaattgagtggtgaagattggacatggaacaatttaaacacattatgt
tgggcaataggatccatatccgggtcaatgatggaagaacaggagaacagatttctggtg
atggttattcgtgacttgctgaatctatgtgaaatgacaaaaggaaaagataacaaagct
gttattgcaagtaatattatgtatgttgttgggcagtatccaagattcttaagagcccat
tggaagttcttgaaaactgttgtgaataagttgtttgagttcatgcacgaaacacatccg
ggagttcaggatatggcttgcgacacattcctgaaaattgttcagaagtgcaagcggaag
tttgttattgtacaggtaggagaaaatgaaccatttgtatctgaacttctctcaggcctt
gcaacaacagttgcagatcttgaacctcatcagatccatacattctatgagtctgttggt
catatgattcaagcagagtctgatgtacaaaagcgggaggaatacctgcagaggttgatg
cttcttccaaaccagaaatggagtgaaattatagcacaggcacgacaaagtgttgatttt
cttaaagatcaagatgtgatcaggactgtgcttaatatattgcagacaaatacaagtgtt
gccagtgctcttggaacattttttttgtcccaaatttccgtgatcttcttggacatgcta
aatgtgtacaaaatgtacagtgagcttatatcaagtagcatttcatcaggagggcctttt
gcatctaaaacatcttatgtgaaacttctacggtctgttaaaagggaaactctgaagctc
attgagacattcctggacaaggctgaagatcagccgcagataggaaaacagtttgttccc
ccaatgatggatcctgtccttggtgactatgctaggaatgtgcctgatgctagagagtca
gaagttctttcactttttgccacaatcataaacaagtataagggtgcaatgatagatgat
gtgcctcgcatatttgaagccattttccaatgcacactggagatgataaccaaaaatttt
gaagattacccagagcatcgtctcaagttcttttctttgcttcgtgccattgctactcat
tgttttcctgctctgattcggttgtcaagtcagcaattaaaactagtcatggattcaatc
atatgggcctttcggcatacagaaaggaatattgcggaaactgggctaaatcttttattg
gagatgttgaaaaactttcaggcgtctgagttctgtaaccaattctaccggacatacttt
gtgacaattgagcaagaaatatttgccgtattgaccgacacatttcataaacctgggttc
aagttgcacgtcctagttctgcagcacctgttttgcctggttgagagtggtttattaaca
gagcctttgtgggatgctgccacaattccttatccatatccaaataatgcaatgtttgtt
cgtgaatacaccataaaacttctgggtacttctttccccaacatgactgcagcagaggtt
actcaattcgttgatggattattggaatcaagaaatgacctctctacgttcaagaatcac
atacgtgattttcttgttcaatcaaaagaattttcagctcaggacaacaaagatctatat
gcagaagaagctgccgctcagcgggaaagagagcggcaaagaatgctttctattccaggg
cttattgccccaaatgagatacaagatgaaatggtggactcatag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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