KEGG   Citrus x clementina (clementine): CICLE_v10030876mg
Entry
CICLE_v10030876mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K27970  U-box gene family group I [EC:2.3.2.27]
Organism
cic  Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:cic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cic04121]
    CICLE_v10030876mg
Enzymes [BR:cic01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     CICLE_v10030876mg
Ubiquitin system [BR:cic04121]
 Ubiquitin ligases (E3)
  U-box type E3
   CICLE_v10030876mg
SSDB
Motif
Pfam: Arm U-box ARM_PUB ARM_ARMC5 PUB10_N zf-RING_UBOX zf-Nse ARMC9_ARM KAP HEAT_2 SIL1_FES1_HPBP1_C HEAT ELMO_ARM zf-C3HC4_2 MCAfunc V-ATPase_H_N zf-C3HC4_4 Arm_2 zf-C3HC4 WRM1_C TRIC LRV_2 DUF2755 HEAT_GCN1_C_2
Other DBs
NCBI-GeneID: 18043996
NCBI-ProteinID: XP_006438420
UniProt: V4TJA6
Position
Unknown
AA seq 685 aa
MTKKLYGLGRRVLTFPAVHPCESISPSTLLISLIDLAHDICTYKSEFFSTNKRNALKAIR
QVHNLLIFLEELRVESADIPGSLVISLSELHLTFQRIRYLLEDCTREGARLWMLTKSDRV
SNQLRLFIRAIGTALDVLPLAAIDVSSEVKELVELVMRQARKAIFETDPDDKRVLNDVIR
ILGRFEDGIRPDKSEVKRVLDYLGITKWSQCNQEVKFLDSEITIEYLNVDKRSELALLSS
LMGFLSYCKCIMFDLVDNEASQQVSKKCCNNMLGGLTPDDFTCPISLEIMKDPVTLSTGH
TYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAEESFHKNR
DITRTVLAGSLAAEGAMKLLANFISNRLLEGTSEEKNKAAYEVRLLTKSSIFNRSCLVEV
GCIPSLLKLLSSKDSSTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMLKKGLKVEAR
QHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHW
RVLAAGAVPLLLNLLTSSDSEELITDSLAVLATLAEKLDGTIAILHHGALDMIMKILDSC
TSRAGKEYCVSLLLALCINGGANVVALLVKSPSLMGSLYSLLSQGSSRASKKASALIRIL
HEFYERHSSGSTTPVLPQDRSVHVW
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgacaaaaaaactttacggtttgggtcgccgggtactgacatttccggcggttcatcca
tgtgaatccatttctccatcaacgcttctgatctcactcatcgatcttgcccacgatatc
tgtacttacaaatccgaattcttttcaaccaataaacgaaatgcgctcaaagcgattcga
caagttcacaatctgttgatatttcttgaagaattgcgggtcgagtcggcggatattccg
ggttctctagtcatcagcttgtcggagctgcatttgaccttccagaggattcgttacttg
ttggaggattgtactcgtgaaggtgcccgactatggatgctaacgaaatcggatcgggtt
tcgaatcagttacggctgtttattcgggccattggtacggctctggatgttttgccactg
gcggcgatcgatgtatcaagtgaagtgaaggagttagttgagttggtgatgaggcaagcg
cgtaaagcaatatttgaaactgacccagatgataaacgggtcttaaatgatgtgatccgg
atcttgggtcggtttgaggatgggattcgcccggataagagtgaagtaaaacgggttttg
gattatcttgggatcacaaaatggagtcagtgcaatcaggaggtcaagttcttggattca
gaaattactattgagtacttgaatgtagacaaaagaagcgaattggcacttttgagtagt
ctaatggggttcttgagctactgcaaatgtataatgtttgatcttgttgacaatgaagct
agtcaacaagttagcaagaagtgttgcaacaatatgcttggtggcttaaccccagatgat
tttacgtgtccaatttctttggagatcatgaaagatccagtgacattatccactgggcat
acttatgatcgagcttccatcttgaaatggtttagagctgggaattctacttgtcccaag
acaggtgagaggctacaaagtaaggagttactggttaatttggttcttaagaggatcatt
caggattggtctgttgataacggagtttctattgctgaagaatcatttcacaagaatcgg
gatattacaaggacggttcttgcagggagtttggcagctgaaggagctatgaaattgtta
gctaattttatttctaacaggcttctggagggaactagtgaagaaaagaataaagcagct
tatgaggtccggcttctcaccaaatctagcatttttaacaggtcttgtttggtggaagtt
ggttgcattccaagtttattgaaacttttgtcatcaaaggattcttcaactcaagagaat
gctattgctgctttgttgaatctgtcaaaacattgcaaaagcaagagcatggtagtggag
agtggaggattagattttattgtagatatgctaaagaagggactgaaagttgaagctagg
cagcatgctgctgcgacactgttctacattgcttctatagaagagtacaggaaattgatt
ggtgaaaatccagaggctataccagctttagtggatatggtcagggatggaactgatcgt
agcaagaagaatgcattagtggcaatatttggtctgctaatgcactctggcaatcattgg
agggttcttgcagctggtgcagttcctttgctgcttaatcttttgacttcttctgatagc
gaagaattgattacagattcactggcagttttagcaactctagcggagaagcttgatggg
acaatagcaatactgcaccatggagctttggatatgataatgaagattttggattcttgc
acctcaagagcagggaaggagtactgtgtgtctttattactggctttatgcatcaatggt
ggtgcaaatgtggttgctcttttggtgaagagcccttcactaatgggatcattgtattcc
ctactcagtcaaggctcatcacgcgctagcaaaaaggccagtgctctaattaggatcctt
catgaattctatgaaagacattcatctggctcaacaactccagttcttcctcaggaccgc
tctgtccatgtatggtaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (24)   
   Pfam (24)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system