KEGG   Citrobacter sp. CRE-46: AN232_17025
Entry
AN232_17025       CDS       T05520                                 
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
cie  Citrobacter sp. CRE-46
Brite
KEGG Orthology (KO) [BR:cie00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cie03016]
    AN232_17025
Enzymes [BR:cie01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     AN232_17025
Transfer RNA biogenesis [BR:cie03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AN232_17025
SSDB
Motif
Pfam: RNB OB_RNB S1 CSD2 PilZ OSR1_C ODP
Other DBs
NCBI-ProteinID: AWS96784
UniProt: A0A2Z3X7T4
Position
complement(3429163..3431097)
AA seq 644 aa
MLQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHTEKDRESAEPEELIEPFLTRFVGKVQGKNDRLSIVPDHPLLKEAIPCRAARGVEH
EFKEGDWAVAEMRRHPLKGDRTFYAELTQFITFADDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLVRQDLTALNFVTIDSASTEDMDDALYAEELADGKLQLTVAIADPTAWIAEGSK
LDKTAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMIITADGTIEDNITF
FAATIESKAKLAYDNVSDWLEGTGDWQPENDAIAEQIRLLHRICLSRGEWRHNHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDTLGFGIYNVHMGFD
PANADALAALLKTHGMHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSYAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGETIARPQDDTTLQMAERRRLNRM
AERDVGDWLYARFLSDKAGTDVRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQESGTVQIKGEVVYKVTDVIDVTIAEVRMETRSVIARPAV
NT seq 1935 nt   +upstreamnt  +downstreamnt
atgcttcaggacaacccgctgctagcgcagcttaaacagcaactacattcccagacgccg
cgtgctgaaggggtggtaaaagccacggaaaaaggctttggcttcctggaagtcgatgca
caaaaaagctatttcattccaccgccgcagatgaaaaaagtgatgcatggcgaccgtatt
gttgcggtgatccatacggaaaaagatcgtgagtctgctgaaccggaagagctaatcgaa
cccttcctgacgcgcttcgtgggtaaagttcagggcaaaaatgaccgtctgtctattgtg
ccggatcatccgttactgaaagaggcgatcccttgtcgcgccgcccgtggcgttgagcat
gaatttaaagaaggtgactgggccgtggcagaaatgcgccgccatccgctgaaaggcgat
cgcaccttctacgctgaactaacccaatttatcacttttgcggacgatcactttgtcccg
tggtgggtcacgctggcgcgccataatcttgaaaaagaagcaccggacggcgttgcgacc
gaaatgctggacgaaggtctggtgcgtcaggacctgaccgccctcaatttcgtcaccatc
gacagcgccagtactgaagatatggacgatgcgctgtatgctgaagaactggccgatggc
aagctacagttaactgttgctatagccgatcctaccgcctggattgcagaaggcagcaaa
ctggataaaacggcgaagattcgtgcgttcaccaactatctgccgggattcaatatcccg
atgctgccacgtgaactgtctgacgatctctgttctctgcgcgcgaacgaagtacgcccg
gttctggcttgccgcatgatcattaccgccgacggtacgattgaagacaacatcaccttc
ttcgctgcgactatcgagtctaaagcgaagttggcctatgacaacgtctccgactggctg
gaaggcaccggcgactggcagcctgaaaacgacgcaattgctgaacaaatccgtctgctg
catcgtatttgtctgagccgtggtgaatggcgtcacaaccacgcgttagtatttaaagat
cgtccggattaccgttttgtcctcggtgaaaaaggcgaagtgctggatattgtggcggaa
ccgcgtcgcatcgctaaccgtatcgtggaagagtcaatgattgcggcaaatatttgtgct
gcacgcgttcttcgcgacacgctgggctttggaatttataacgtccatatgggatttgat
ccggcaaatgctgacgcactggccgcgctactgaaaacccatggtatgcatgtagatgcc
gaagaggtcctgacgctggaaggcttctgcaaactgcgccgcgaactggatgcgcagcct
tccggtttcctcgatagccgtatccgccggttccagtcgtatgctgaaatcagcaccgaa
ccaggtccgcactttgggctgggtctggaagcatatgccacctggacctctcctattcgt
aagtatggcgacatgatcaaccaccgtctgcttaaggccgtcatcaaaggcgaaacgatt
gcccgtccacaggatgatacgaccctgcaaatggccgaacgtcgtcgtctgaaccgcatg
gctgaacgcgatgtgggtgactggttatacgcccgcttcttgagcgacaaagccggcacc
gacgtccgcttcgcggccgagatcattgacgtcagccgcggcggtatgcgagtgcgttta
gtggataatggcgcagtcgcatttattccggccccgttcctgcatgctgttcgtgacgaa
ctggtatgcagtcaggaaagcggcaccgtacaaatcaaaggtgaagtggtttacaaagtc
acggatgtgattgatgtaaccattgccgaagtgcggatggaaacccgcagcgttatcgca
cgtccagccgtgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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