KEGG   Citrobacter sp. FDAARGOS_156: AL515_06815
Entry
AL515_06815       CDS       T04313                                 
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
cif  Citrobacter sp. FDAARGOS_156
Pathway
cif00730  Thiamine metabolism
cif01100  Metabolic pathways
cif01240  Biosynthesis of cofactors
cif04122  Sulfur relay system
Module
cif_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:cif00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    AL515_06815
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    AL515_06815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cif03016]
    AL515_06815
Enzymes [BR:cif01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     AL515_06815
Transfer RNA biogenesis [BR:cif03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    AL515_06815
SSDB
Motif
Pfam: ThiI THUMP QueC Diphthami_syn_2 Rhodanese tRNA_Me_trans
Other DBs
NCBI-ProteinID: AMH13583
Position
1470905..1472353
AA seq 482 aa
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDEDLAVVRHWDHVEVRAKDESQR
LDIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHEFS
SIEVERYVGGGLNQHIESARVKLTKPDVTVNLEIENDRLLLVKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISHDKEHIINLAREIGTEDFARTMPEYCGVISKSPTVKAIKAKI
EAEEENFDFSILDKVVEEANNIDIRDIAQQTQQTVVEVETVSGFGPNDVILDIRSVDEQD
DKPLKVDGVDVVSLPFYKLSTKFGDLDQSKTWLLWCERGVMSRLQALYLREQGFENVKVY
RP
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgaagtttatcattaaattgttcccagaaatcaccatcaaaagccaatctgtgcgtttg
cgctttataaaaattctgacagggaacattcgtaacgttttaaagcactatgatgaagac
cttgccgttgtccgccactgggatcacgttgaggttcgcgcgaaagatgaaagccagcgc
ctggacattcgcgacgctctgacccgtattccggggatccaccacattctcgaagtagaa
gacgtgccgtttaccgatatgcacgatattttcgagaaagcgctggtacagtatcgtgac
caactggaaggtaaaaccttctgcgtacgcgttaagcgtcgtggtaagcatgagtttagc
tccattgaggtggaacgttatgttggcggtggactgaaccagcatattgaatccgcgcgc
gtgaagctgacgaagccggacgtgacggttaatcttgaaatcgaaaacgaccgtctgttg
ctggttaaaggccgttatgaaggtattggcggtttccctattggtacgcaggaagacgta
ctgtcgctgatctccggtggtttcgactctggcgtgtccagctacatgctgatgcgtcgc
ggctgccgcgtacattactgcttctttaacctcggcggcgcagcgcatgaaatcggtgtt
cgtcaggtggcgcattatctgtggaaccgttttggtagttcgcatcgcgtgcgttttgtt
gctatcaactttgaaccggtggtcggtgagatcctggagaaagtcgacgacggtcagatg
ggtgtggttctcaagcgtatgatggttcgcgcggcgtcgaaagtcgctgagcgctacggc
gtacaggcgctggtcaccggtgaagcactgggccaggtgtccagccagacgctgaccaac
ctgcgtttgatcgataacgtatcagacactctgatcctgcgcccacttatctcccatgat
aaagagcacatcatcaatctggcgcgtgaaattggcaccgaggattttgctcgtaccatg
ccggaatactgcggtgtaatttcaaaaagcccgacggtgaaagcgatcaaagcgaagatt
gaggccgaagaagaaaacttcgatttctctatcctcgataaagtggttgaagaagcgaat
aatattgatattcgcgatattgcccagcagacgcagcaaaccgtggtagaagtggaaacc
gtgagcggtttcggcccgaacgatgtgatcctggatatccgttctgtggatgaacaggat
gataaaccgctgaaggttgacggcgtggacgtcgtttctctgccgttctacaagctgagc
actaaattcggcgatttggaccagagcaaaacctggctgctgtggtgtgaacgcggggtg
atgagccgtctgcaggcgctttatctgcgcgagcagggctttgaaaacgtgaaggtgtat
cgcccgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system