KEGG   Citrobacter sp. FDAARGOS_156: AL515_19565
Entry
AL515_19565       CDS       T04313                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
cif  Citrobacter sp. FDAARGOS_156
Brite
KEGG Orthology (KO) [BR:cif00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cif02044]
    AL515_19565 (tssC)
Secretion system [BR:cif02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AL515_19565 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: AMH15926
Position
complement(4192325..4193854)
AA seq 509 aa
MSVQEHTSSVAATTTSERSVYQSLFDKINLSPVSALKNVDAWQSDEALSDAAPAERVTAA
IQVLVSCLADAAQPVERLDKTLLDEQIARLDKQISDQVNEVMHHAEFQKQESLWRGLHSM
ITGIDFRRNVRVEMMDISKDALRDDFDDAPELIQSGLYRHVYIEEYDQPGGEPIAAMISA
YEFDNSPQDIALLRNISGVSAACHMPFIGAVGPKFFLKENMEDVAAIKDINDYFERAEYI
KWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHEKYLWTSASFSF
AVNMVKSFIKNGWCVQIRGPQAGGAVKDLPIHLYDLGTGNQVKIPSEVMIPETREFEFAN
LGFIPLSYYKNRDYACFFSANSAQKPAQFDTPEATANSRINSRLPYIFLLSRIAHYLKIL
QRENIGTTKDRRLLELELNNWLRSLVTEMTDPGDDLQASHPLRDGRVVVEDIEDNPGFFR
VRLYAIPHFQVEGMDVSLSLVSQMPKSKS
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtctgttcaggaacatacctcttcagtcgcggccactacgaccagtgaacgcagcgtt
tatcaatccctctttgacaaaattaatctttccccggtttcggcattaaaaaatgttgat
gcgtggcagagtgatgaagcgctttctgatgccgctccggctgaacgcgtgaccgccgct
attcaggttctggtctcatgtctggcggatgccgcacagccagtagagcgcctggataaa
acgctgcttgatgaacaaattgctcgccttgataagcagattagcgatcaggtaaatgaa
gtcatgcatcatgctgagtttcagaagcaagaatcgctctggcgcggtttacattcgatg
atcaccggcatcgattttcgtcgaaatgtccgggtagaaatgatggatatcagcaaggat
gcgttacgtgatgattttgacgacgcgccggaacttatccagagcgggttataccgccat
gtttatattgaagaatatgatcagccaggcggcgaacccattgcggcaatgatttcagca
tacgaatttgataacagcccgcaggatattgcactgctgcgcaatatttctggcgtctcg
gcagcctgtcatatgccgtttattggtgccgtggggccgaaattcttcctgaaagaaaat
atggaagacgtcgcggccataaaagatatcaatgattatttcgaacgtgctgaatacatc
aagtggaaagcatttcgtgatagcgatgattcacgctacatcgggctgactatgccgcgt
gtgctgggtcgcctgccgtacggccctgatacggtgccggtacgcagttttaactatgtt
gaagaagttaaggggccggatcacgaaaaatatctgtggaccagcgcctctttctctttc
gctgtcaacatggtgaaaagttttatcaagaatggctggtgcgtccagatccgtgggccg
caggcgggcggcgcagttaaagatttgcctatccatttgtacgatctgggtacgggtaat
caggtgaagattccatctgaggtgatgattccggaaacccgcgagtttgaattcgctaac
ctcggctttattccgctttcatattataagaatcgtgattacgcctgcttcttctctgct
aactcggctcaaaaacctgcacagtttgatactccggaagcgacggctaacagccggatt
aactcacgtctgccgtatatcttcctgctttctcgcatcgctcactacctgaaaatcttg
cagcgggaaaatattggcacgaccaaagatcgccgtttgcttgagcttgaacttaacaac
tggctgcgcagtctggtaaccgaaatgaccgatcctggcgacgacttgcaggcatcacac
ccgctgcgtgatgggcgtgtcgtggtggaggatattgaggataaccccggtttcttccgt
gtacgcctgtatgccattccgcatttccaggttgaaggtatggatgtcagtctgtcgtta
gtttcacaaatgccgaagtcgaaatcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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