KEGG   Corynebacterium imitans: CIMIT_12090
Entry
CIMIT_12090       CDS       T03237                                 
Name
(GenBank) poly(A) polymerase PcnA
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
cii  Corynebacterium imitans
Pathway
cii03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cii00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CIMIT_12090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cii03019]
    CIMIT_12090
Enzymes [BR:cii01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     CIMIT_12090
Messenger RNA biogenesis [BR:cii03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     CIMIT_12090
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: AIJ34521
UniProt: A0A076NQX1
Position
complement(2545394..2546890)
AA seq 498 aa
MVTTPKSSSPLFDLPAADDPNAVAVLMARAQRGVMELADFLTPLAQCFAERGETLYMVGG
PVRDAMLGKLGHDLDFTTSARPEVTQEILDAWSEKTWDAGIEFGTVAAVKQGKQVEITTF
RADLYDGVTRNPEVTFGDTLEGDLIRRDFACNAMAIELSLVDGALAPTFHDPVGGLEDLL
ARRLDTPQAPEVSFRDDPLRMLRAARFVSQLGFDVAPRVFEAMRAMAEEINRITVERVQA
ELDKLMLGARPWEGIDVLVRTSLADEILPEIPALQLEQDEHMQHKDVYWHSLTVLRQATE
LEDEGPDLKLRWAALLHDIGKPDTRAVKPGGGVSFHHHEVVGAKMTRKRMRKLKYPKHVT
EDVGQLVFLHMRFHGFGEGQWTDSAVRRYVTDAGELLPRLHKLVRADCTTRNPKKARRLQ
RTYDHLEERIADIAAKEDLARVRPDLDGNEIMQILGLQPGPEVGKAWKYMKELRLERGEL
EHDEAVTELKKWWESQHG
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggtgactacgccgaaatcttcttcgcccctgttcgacctccccgccgcggacgacccc
aatgcggtcgccgtgctgatggcgcgcgcgcagcgaggcgtcatggagctcgccgacttc
ctcaccccgctggcgcagtgtttcgcggagcgcggcgagaccttatatatggtcggcggt
ccggtgcgcgatgcgatgctgggcaagctcggccacgacctcgacttcaccacctccgcg
cgcccggaggtgacccaggagatccttgatgcctggagcgagaagacctgggacgcgggc
atcgagttcggcaccgtcgccgcggtcaagcaggggaaacaggtcgagatcaccaccttc
cgcgccgatttgtacgacggcgtgacccgcaacccggaggtcaccttcggcgacacgctc
gaaggcgatctgatccgccgcgacttcgcctgcaatgcgatggcgatcgagctttcgctt
gtcgacggcgcgttggcccccaccttccacgaccccgtcggcggactcgaggatctgctc
gcgcgccgcctggatacgccccaggctccggaagtgtcgttccgggacgacccgctgcgc
atgctgcgtgccgcccgttttgtctcccagctgggcttcgacgttgctccccgcgtcttc
gaggcgatgcgcgcgatggcagaggagatcaaccggatcacggtggagcgcgtccaggcg
gagctggataagctcatgctcggcgcgcgaccttgggaagggatcgacgtgctcgtgcgg
accagcttggccgacgagattctgccggagattcctgccctgcagttggagcaggatgag
cacatgcagcacaaggacgtgtactggcactcgctgaccgtgttgcgccaggccaccgag
ctggaggacgagggcccggacctcaagctgcgctgggcggcgcttctgcatgacatcggc
aagccggatacccgtgcggtgaagccgggcggcggcgtgagcttccaccaccacgaggtg
gtcggtgcgaaaatgacgcgcaagcgtatgcgcaagctgaagtaccccaagcacgtcacc
gaggacgtcggccagctcgtcttcctgcacatgcgctttcacggtttcggcgaggggcag
tggaccgactccgccgtgcgccgctacgtgacggacgcgggcgagctcctcccccgcctg
cacaagctcgtgcgcgccgattgcaccaccaggaatccaaaaaaggcgcgcaggcttcag
cgcacctatgatcacctggaggagcgcatcgcggacatcgcggccaaggaggacttggcc
cgggtgcgccccgatttggacgggaacgagattatgcagattctcgggctccagccgggc
ccggaggtggggaaagcatggaaatacatgaaggaattgcggctcgagcgcggcgagctc
gagcacgacgaagcggtcacggaactgaagaagtggtgggagtcgcagcatggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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