KEGG   Coccidioides immitis: CIMG_00664
Entry
CIMG_00664        CDS       T01114                                 
Name
(RefSeq) tRNA-intron endonuclease
  KO
K15323  tRNA-splicing endonuclease subunit Sen34 [EC:4.6.1.16]
Organism
cim  Coccidioides immitis
Brite
KEGG Orthology (KO) [BR:cim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cim03016]
    CIMG_00664
Enzymes [BR:cim01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     CIMG_00664
Transfer RNA biogenesis [BR:cim03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    CIMG_00664
SSDB
Motif
Pfam: tRNA_int_endo
Other DBs
NCBI-GeneID: 4565641
NCBI-ProteinID: XP_001246893
UniProt: J3KHH1
AA seq 302 aa
MVNTPVLPIPISFISGHYFLFSTDAVTYLRREHNICGVLIGTLPQIPQQNIFLGLPLELM
PEEARLLVEKKIAYIVDDAQVHNQGMKTLADEDRRRHLESLEQHGRRAALVQSSKKEHLK
EKALKQSKKSKSQTSDAAKASQDGQGQSEDLLFSSVDDRTNDPIQSSSAVTSGAVFGVTP
ADSLALFPKPPPLGGNSLPKVPSSYPLYAHLHSKGYFLSPGLRFGCQYMAYPGDPLRFHS
HFLVSASEWDEEINLMDLVVGGRLGTGVKKGYLIGGEIPSDEQGKGTDERTVRTFSLEWA
GM
NT seq 909 nt   +upstreamnt  +downstreamnt
atggtcaacacaccagtgctcccgattcccatttccttcatatcgggccattattttctc
ttctcaactgatgcagtcacctatctacgccgagaacacaatatttgcggcgttctcatt
gggactctgcctcagattccgcagcagaatatcttcctgggtttaccattagagcttatg
ccggaagaggctaggctcttggttgagaaaaagattgcttatattgtggatgatgcacaa
gtgcacaatcaaggaatgaagactctggctgatgaagatcggcgacgtcatcttgagagc
ttggagcaacacggacggcgagcagctttagtccaatcaagcaaaaaagaacatctaaaa
gaaaaagcactgaagcaatccaaaaaatcgaaatctcagacctcagatgcagcaaaagcg
tcgcaagatggacagggacagtcagaagacctgctttttagttctgtagacgaccgtact
aatgaccccatccaatccagttcagccgttacttcaggagccgtatttggtgtcactcct
gctgactctctcgctctctttcccaaacctccacccttaggtgggaattctctgccaaag
gtcccttcatcatatcctttatacgcccatttgcattccaaaggatatttcttgtctccc
ggtctccgttttggttgccagtacatggcttacccgggtgatccgcttcgattccactcc
catttcctagtttccgcctctgagtgggatgaggagataaatttaatggacttggttgtt
ggaggtcgtctaggaaccggtgtaaagaagggatatcttatcggcggagaaattccgtcc
gatgagcaaggaaaaggaaccgatgaaaggactgtgaggacgtttagtttggaatgggct
ggaatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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