KEGG   Coccidioides immitis: CIMG_06097
Entry
CIMG_06097        CDS       T01114                                 
Name
(RefSeq) cyclin ccl1
  KO
K06634  cyclin H
Organism
cim  Coccidioides immitis
Pathway
cim03022  Basal transcription factors
cim03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cim00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CIMG_06097
  09124 Replication and repair
   03420 Nucleotide excision repair
    CIMG_06097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cim03021]
    CIMG_06097
   03400 DNA repair and recombination proteins [BR:cim03400]
    CIMG_06097
Transcription machinery [BR:cim03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CIMG_06097
DNA repair and recombination proteins [BR:cim03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CIMG_06097
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N
Other DBs
NCBI-GeneID: 4562378
NCBI-ProteinID: XP_001242201
UniProt: J3K7E7
AA seq 425 aa
MLEDDIYRTSTQYRLWSFTKESLNSIRENTNSLASVRVRDAIRRAQEARRATSTPGGSDE
PDSKTNTPAGPESEIECLTPEDELELVQYYCEKTLELGDEYKPPLPTTVRATAIQYLRRF
YVTNSPMTYHPKSIMPCALFLATKTDNYYMSLRSFAEKIPNTTAEDIIAPEFLLTQGLRF
AFDIRHPFRGLEGGVMELTAIAKGEGAPGPHHPEQTAAKLQEAIQAIPPAEGAAPSASIT
DRIASAHGKTRQILKTAAQMTDAYFLYTPSQIWLSALLLVDQPLLEFYLDTKLGPAPSGS
SPPASAPESALAMLFALRAKLTGVLESCSTLLGTYLNTHDPNAPPDPARMKNLKRIGKKL
YHCQNPEKFSELSAGRTQRREGSGSTTPALLPTAGGGDVDETEGPAIKKRKLEKEAEEAG
NGGNK
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgctcgaagacgacatctatcggacgtccacccagtaccggctctggtcgttcaccaag
gaatccttaaattctattcgagaaaacaccaattcccttgcgagcgttcgtgttcgagat
gcgatccgtcgggcgcaagaagctcgccgggcgacttcgacgcctggaggcagcgatgaa
ccggattcaaagaccaatacacccgcagggcctgagagtgagattgagtgtttgacgccg
gaagacgaattggaattggtgcaatattattgtgagaaaacgctggagctgggggatgaa
tacaagcctccgctgccgacgacggtgagggccaccgctattcaatatctgcgccgtttc
tatgtcaccaactcgcctatgacctatcacccgaaatcaataatgccctgtgcccttttt
cttgccacgaaaacggacaattactacatgtccctgcgttcatttgcggaaaagatccct
aatacgactgcagaggatattatagctccagaattcctgcttactcagggcctacgattc
gcgtttgacatccgccacccctttcggggcctggaaggcggagtcatggaactcaccgcc
atagcaaaaggcgaaggtgcgcctggtccccatcacccagagcaaacggccgcaaagctc
caagaagccatccaggccattcctcccgcagagggagcggcaccgtcagcctccataacg
gaccgtatcgcctccgcccatgggaaaacaagacaaatcctcaaaaccgccgcacaaatg
acagatgcctacttcctttacacaccctcacagatctggctttctgccctcctcctcgtg
gaccagcccctcctagaattttacctcgatacaaaactcggccccgcgccgtctggttct
tccccgccagccagcgctccagaatccgctctagccatgctttttgccctccgtgcaaag
ctcacgggtgtcctggagtcttgctccacgctcctgggcacgtatctaaacacccatgac
cccaatgcccctccagatccggcccgcatgaagaacctaaaacgcattggcaaaaaactt
taccactgccaaaaccccgagaagttctctgagctaagcgcgggtaggacccagaggagg
gagggttcagggagcaccacgccagccctactacctaccgctggcggaggcgatgtggat
gagactgagggtcctgctatcaaaaagaggaagttggagaaggaggcggaggaggctggt
aatggtggtaataaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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