KEGG   Ciona intestinalis (yellow sea squirt): 100170066
Entry
100170066         CDS       T01056                                 
Symbol
zf(cxxc)-5
Name
(RefSeq) LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1
  KO
K00558  DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin00270  Cysteine and methionine metabolism
cin01100  Metabolic pathways
Module
cin_M00035  Methionine degradation
Brite
KEGG Orthology (KO) [BR:cin00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    100170066 (zf(cxxc)-5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cin03000]
    100170066 (zf(cxxc)-5)
   03032 DNA replication proteins [BR:cin03032]
    100170066 (zf(cxxc)-5)
   03036 Chromosome and associated proteins [BR:cin03036]
    100170066 (zf(cxxc)-5)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cin02048]
    100170066 (zf(cxxc)-5)
Enzymes [BR:cin01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.37  DNA (cytosine-5-)-methyltransferase
     100170066 (zf(cxxc)-5)
Transcription factors [BR:cin03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    100170066 (zf(cxxc)-5)
DNA replication proteins [BR:cin03032]
 Eukaryotic type
  DNA Replication Termination Factors
   DNA methylation enzymes
    100170066 (zf(cxxc)-5)
Chromosome and associated proteins [BR:cin03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100170066 (zf(cxxc)-5)
Prokaryotic defense system [BR:cin02048]
 Restriction and modification system (R-M system)
  Type II R-M system
   DNA methyltransferases
    100170066 (zf(cxxc)-5)
SSDB
Motif
Pfam: DNA_methylase DNMT1-RFD BAH zf-CXXC PUA
Other DBs
NCBI-GeneID: 100170066
NCBI-ProteinID: XP_018671874
Position
Unknown
AA seq 1307 aa
MSKEGDVSCSSEGKKQPTILDMFARKSKRKAPTKSPRGDSQVVTPDGKKPRRDRDVSDKE
NEKPGIKVEVKKSSMKCRECRQLLDDVAIFGGDVDQAEEEFVLLTHESLSLFVGNEETGR
PQHKITDFTVYDKSTHLCPFDAGLIEKNVELYFSGLVKPIYDEDPGVGTGIPGKRLGPIN
EWFTAGFDGGEKALVGFSSAFADYFLMEPSHAYAPLWASIQEKIHMSKIVIEFLSDVPDA
DYEDLVNRIQTSVPPPTLGVAKFTEDSLLRHAQFVVEQVESYDNARSDEEDSLLGTTCVR
DLIHLAGVTLGKRRVARRSAVVKEKAMKASSTKATTTRLVAEVMEKFFGGTVDVTTGNKI
RRRRCGVCEACLKPECGKCTSCKDMVKFGGGGKLKQTCIDRRCPNLGLDLMEDSDPDDKD
EKVKPSPSKMKVIKAGKVTTSWVGEALYEEGGKVYYPGVRVGGDVIEGGECVSVKNKDEG
GLPYIGRVVYMWGESGGKMVHVDWFMRAADTILQETSQPDELLIIDECDDLSVECIAGKV
DVSHRVPHQNWSFMGGVEEQHPTTDGVSSFYYQKMYVPEFARFVDPPSNEPTDDPDFCPS
CVRINEGKMRQVAVGKNELKRENGKIFYEFVCKDGVEYGVGDSVYLSVETYSFKSKNKHK
KQVLPKSLDEIDEDEYPEFYRKGGYVKGSNLEVAEPFRIGRINEIFGGKKXSISLVVTKF
YRPENTNKPLKSNSYCDLNLLYWSNDKVEVDFSFVEGKCEVECELDLSVTVAEYSRKAAN
RFYFSEVYNEEDGTFTVPPSTARRSGVELLKQKAKGVKPKLTKMNKMMKKDETIVGEDET
KIPKLRSLDVFSGCGGLSEGFHQAGIAEPSYAIELWEPAAQAYRLNNPGATVFTEDCNVL
LEMVMNGEERSKCGQRLPQKGDVELLCGGPPCQGFSGMNRFNSREYSRFKNSLVVSYLSY
CDYYRPRFFLLENVRNFVSFKNCMVLKLSLAALLRMGYQCTFGVLQAGHYGVSQTRRRAI
ILAAAPGEQLPLYPEPLHTFSTRGGSLSAQVGDTRYTNNIKWSTSAPYRTITVHDAMSDL
PKIPNGHAKLEMPYTGEPLTHFQRMMRGKDYQGVVRDHICKDMSPLVAARMALIPLIPGS
DWRDLPNKPHKLSDGTTAKVLRYEYHDKKQGRSSTGGMRGVCSCAEGRACDAMDRQFNTL
IPWCLPHTGNRHNNWAGLYGRLCWDGFFSTTVTNPEPMGKQGRVLHPQQHRVVSVRECAR
SQGFPDSYRFFGSILDKHREVGNAVPPPMSKAIGLQIKKSLEWKVQQ
NT seq 3924 nt   +upstreamnt  +downstreamnt
atgtcaaaggaaggtgacgtcagttgttcaagtgaaggaaagaaacagcccaccattctt
gatatgtttgcgaggaaaagtaagcggaaagcccccacaaagtccccacggggggattcc
caggtggtcacccccgatggtaagaagccccgaagggaccgcgatgtttccgacaaagaa
aacgaaaaacccgggataaaagttgaggtaaagaaaagttcgatgaaatgtcgggaatgt
cggcaattattggacgacgttgcgattttcggcggcgacgtcgatcaagctgaagaggag
ttcgtgttgttgacacacgagtcgttgtcgttgtttgtggggaacgaggaaacagggcga
cctcaacataagataactgatttcacggtatacgacaagagcacccacttgtgtccgttt
gacgccggtttaatcgagaagaatgttgagctttactttagtgggctggtgaagccgatt
tatgacgaagaccccggggttgggacggggattcccgggaaaaggttggggccgatcaat
gagtggtttacggcaggctttgatggcggagagaaagctctcgttggattctcgtcggcg
ttcgctgattatttcctgatggagccgtcacacgcttacgcccccctgtgggcgagtatt
caagagaaaatccacatgagtaaaattgtcatcgagtttctctcggatgtccccgacgca
gattacgaagatctcgtcaatcggatccaaacatctgtccctcccccaacactaggtgtc
gccaagttcaccgaggattcgttgcttcgtcacgcccagtttgtggtcgaacaggttgag
tcgtacgacaacgcacgatcggacgaggaagattctttacttggaaccacatgtgttagg
gacctcatccatcttgctggggtaacgttgggtaaacgacgggtggcgcgtcgctcggct
gtcgtgaaggagaaagctatgaaggcatcatctacgaaagccaccaccacgaggttggtc
gccgaggtgatggaaaagttcttcgggggaacggtggatgtaacgaccgggaataaaata
agacggaggaggtgcggggtttgcgaagcttgtttgaaaccagaatgtgggaaatgtaca
tcgtgtaaggacatggtcaagtttggtggcgggggcaagttgaaacagacgtgtatcgac
cgaagatgtcccaacttggggctggatttgatggaggattcggatcccgacgacaaagat
gaaaaagtgaaaccgtcaccgtcgaagatgaaagttatcaaagctgggaaggtcacgacc
tcatgggtgggggaggcgttgtatgaggaggggggtaaagtatattaccccggggttcgg
gtggggggtgatgtcatagaggggggtgagtgcgtatcggtaaagaacaaagatgagggt
gggttgccgtacattgggagggttgtgtatatgtggggagaaagtggggggaagatggta
cacgtggattggttcatgagagctgctgatacgatattacaagaaacctctcaacccgat
gaacttttgatcatcgatgaatgcgacgacttatcggtggaatgtatcgctgggaaagtt
gatgtgagccatcgcgtcccgcatcagaattggtcgtttatgggaggcgtagaagaacaa
cacccaacaacggatggtgtttcgagtttctactaccagaagatgtacgtgcctgagttt
gcgaggttcgttgacccaccatccaacgaacccaccgatgaccccgacttttgccccagt
tgcgttcgtattaacgaggggaaaatgagacaggttgcggtcgggaagaatgagttgaaa
cgagaaaacggaaaaatattttatgagtttgtttgtaaagacggggttgagtatggggtt
ggggattccgtgtatttgtccgtggaaacatattcctttaaatcaaagaacaaacataag
aaacaagttttgccgaaaagtttggacgagattgacgaagatgaatatccggagttttat
cggaagggaggttatgtgaaggggagcaacctggaggtggccgagccgtttcgcatcggg
aggatcaacgagatatttggggggaagaagnggagtataagtttggttgtcacaaagttt
tatcggccggaaaatacaaacaaaccgttgaagtcgaactcgtattgtgacctcaacctg
ctgtattggagcaatgataaagttgaggtcgatttcagtttcgtggaaggaaaatgtgaa
gttgaatgtgagttagacctcagtgtcactgtggctgaatattcaaggaaagccgcgaac
aggttttacttcagcgaggtttacaacgaggaagacggaactttcaccgtacccccgtct
actgcgaggaggtcaggggtcgaactgctcaaacaaaaagctaaaggagtaaaacccaaa
cttaccaagatgaacaaaatgatgaagaaagatgagacgattgtgggggaagatgagaca
aagatcccgaagttacgatcgttggatgtcttctcggggtgtggggggttatcggagggg
ttccaccaagcggggattgccgaaccatcgtatgccattgaactgtgggagccggctgct
caagcgtatcgcctcaacaaccccggggcgaccgtgtttacagaagattgcaacgtgttg
ttggagatggtgatgaacggagaagaacgcagtaaatgtggccaacgactgccacaaaag
ggcgatgtggagttactatgtgggggacctccatgtcaaggtttcagcggaatgaatcga
ttcaactcgagggaatactcgaggttcaagaattcacttgtcgtgtcgtatctgtcttat
tgcgattattatcggccgagattctttttgttggaaaacgttcgaaactttgtttcgttc
aagaactgtatggtgttgaagttgtcgcttgctgctttgttaaggatgggttaccaatgt
accttcggggtgttgcaagcggggcattacggagtgtcacaaacccgtcgtcgagctatt
atactcgctgctgcccccggtgagcaactaccattgtatcccgaacccctccacactttc
tccacacgagggggcagtttatccgcgcaggtcggcgacacgaggtacacgaacaacatc
aagtggtcgacgtcggctccgtatcgaacgatcaccgtgcacgatgcgatgtcggatcta
ccaaagataccaaacggacacgccaaacttgagatgccatacacaggagagccattaacg
cactttcaacggatgatgcgcggcaaggattatcagggtgtcgtacgcgaccatatttgt
aaagacatgagccctctagtggcagcaaggatggctctcatcccgttaatccccggctcc
gattggcgcgaccttccaaacaaacctcacaaattatccgacggcacgacggcaaaagtg
ttgaggtacgaataccatgacaagaaacagggtcgcagctcgacgggaggcatgaggggc
gtatgttcgtgcgctgagggtcgagcatgtgacgccatggatcgtcagttcaacactttg
ataccatggtgtctcccacatacaggcaaccgacataataactgggctgggttgtacggt
agattgtgttgggacggattcttcagcacaacggtcaccaaccctgaacctatgggtaaa
caggggagggtgttgcatccacagcaacaccgtgtggtgagcgtgagggagtgcgcacga
tcacaagggttcccggattcgtatcgtttcttcggtagtatacttgacaaacatcgcgag
gttggcaacgcggttcccccccccatgtccaaagctatcggattgcaaatcaagaagtca
ctcgagtggaaagtacaacaatga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (114)   
   KEGG ORTHOLOGY (1)   
   RefGene (110)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (141)   

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