KEGG   Ciona intestinalis (yellow sea squirt): 100175837
Entry
100175837         CDS       T01056                                 
Name
(RefSeq) Fanconi anemia group M protein homolog isoform X1
Organism
cin  Ciona intestinalis (yellow sea squirt)
SSDB
Motif
Pfam: ResIII DEAD Helicase_C FANCM-MHF_bd
Other DBs
NCBI-GeneID: 100175837
NCBI-ProteinID: XP_009860190
Ensembl: ENSCING00000024365
Position
11:complement(1882144..1899493)
AA seq 1373 aa
MDSFDKSAGNIWIYPTNYPVRDYQLSITKTALFKNTLVVLPTGLGKTFIASVVMYNFYRW
FPQGKIIFIAPTKPLVAQQSKACYDIMGIPADDQAEMTGSSMQVKKRQDLWTNKRVFFLT
PQLFNNDLASGTCPACDIKCVVFDEAHKAQGNYAYCQVIQKILVHSKNFRVLALSATPGS
NMFAVQQVITNLLISTTEIRSEDAIDVRQYTHTRTVEKVVVKLCDRIMMFKEKYLAVIQV
LINRLVSNDILYHKDAKNITKYALLMARDQFRKVSGLHKASMCIIEGDFATAISLYHGLE
LLLQHGMKSFFIFLKGIMDGAKANLRTRNVLSANDQFQEIYQELTDLFSSHNTNTYVQTH
KEAYSDLSICYSHPKLRKLEEIVLTYFHNIQQCADTSNKSTETKVIVFCQYRDSVQEVTD
LLQQHEPLIRPIKFVGHAPTAKNESPCREGNKSKRFTQKDQLEAVARFCSGVYNTLIATC
VGEEGLDIGAVDLIVCFDSHRSPIRLVQRMGRTGRKRNGKIVMLITEGKEERDYNSSVAS
RKSIGKAMHAGSKSLQYYPHNPPMIPHGIKPVCHKMFITVKKLPSNTKKRKISTDSLNSY
FKSTSKESTKSLFLSADEIMEWKRDFYIERDELSHIPKVSSNSACIYLNKEFKFKKQEIA
PKVMVDWLPWQCRLQTTKLVEHSGRTKLLHEMLTRNDSVITMETNDREKPTKQSEPIIIS
PTLDILPSKDNVRSPHKQNKNFGDIREIFSKVSKINSIKKIADIAKLFTNHIDFPDRFIK
SSNYLQNAVTDSKPQIICEKTVRLNHKDFDNGDKFEKFGLGLSKNIPQVSPVLVMEESNS
VKTEKIILEEKHQELSTSPVTTHMNCPQTVNTTSAITTSSSCSFNLFLSGTSGGKDCLDT
NISNVNGKSLLPLVKNHAHCDSNTTLDSPDIETPDFGFPDIFALDLDPPNELIEDNPAEK
KPAVNKSLKRKSDCMVDSSCIIPETQEENIPPNKLDPPCKKLKESLKHIKQMSFHELEQT
FDVSADLFDPEFQVDFNLTTLVDCTSFTSSPVVSSAIPKHSVCNTSTERKAAGNITTDKK
VLNGENYTRACQNWETTTDICDKMKNKVAEETFEDDESFLSALVKRKQRKAKCLESDESL
NETGKAIYITSTDNISDTDSESFFHVKKEQTKFDHPRSVLPMNQSLFENKIQCNKQSTPK
LLKFHGKVKPTVMQTKDHAKMFIDNEAEVSGDCDITEDDLSLTDEEMLAFVNDATQLTQH
IDPTTEKSPDEKAMYLKSLHSSEWLKCKQNVEPRYRRNIEVFSQEVETDYSNYLEDSFIV
EHEDSNPPVDHGEITLLSQLPDYSAAKAKTRNQVKMLNVKKKKKRKLIVDFDS
NT seq 4122 nt   +upstreamnt  +downstreamnt
atggatagttttgataaatctgcgggaaatatttggatttatccgaccaactatcctgta
cgtgattatcaactttctataactaagactgcattgtttaaaaacacacttgttgtttta
ccaactggtcttggcaaaactttcattgcttctgttgttatgtacaacttttaccgatgg
tttccacaaggcaagattatttttattgcaccgacaaagccactggtagctcaacaaagc
aaagcttgttatgacattatgggaatccctgcagatgatcaagctgaaatgacagggtct
tctatgcaagtaaaaaaacgacaagatttgtggacaaacaagcgtgtattctttcttaca
cctcaactattcaataatgacctcgccagtgggacatgtcctgcttgtgatattaaatgt
gttgtgtttgatgaagcacataaagctcaagggaattatgcatattgtcaggttattcaa
aaaattttagttcattccaaaaacttcagagttcttgccttgagtgccacaccaggttca
aatatgtttgcagttcaacaggtcattacaaatcttttaatatctacaaccgagattcgt
tctgaagacgcaatagatgtacgccaatacacgcacacacgaactgtggaaaaagttgtt
gtgaaactttgtgataggatcatgatgttcaaagaaaaatatttagctgtgatacaagtt
ttaatcaatcgccttgtttcaaatgacattctttaccataaagatgcaaaaaacattaca
aaatatgcgctgctaatggcaagagatcaatttcggaaagtttctggtttgcataaagcg
tctatgtgtattatcgagggggattttgcgactgctatctctctttaccatggtcttgaa
ctacttcttcaacatggaatgaaatctttttttatatttttgaaaggaataatggatggt
gcaaaagccaacttgagaactagaaatgttttgtccgctaatgaccaatttcaggaaatc
tatcaggagttgaccgacttgttttcatcacacaacacaaacacttatgtgcaaacgcac
aaagaagcatattctgacttatctatatgctacagtcatccgaaattaaggaaattagaa
gaaatagttttaacatactttcacaatatacagcaatgtgcagatacttcaaacaaatca
actgaaaccaaagttattgtgttctgtcaatatcgtgacagtgtacaagaagtaacagat
cttcttcaacaacatgaaccgcttattcgtccgattaaatttgttggtcatgccccaaca
gcaaaaaacgaaagtccttgtagagagggaaacaaaagtaaaagatttactcaaaaagat
caactagaggctgttgctcgattttgttcgggtgtttacaacacgttgatcgcaacatgt
gttggagaggaagggttggacatcggggcagttgatctcattgtgtgtttcgactcccac
agaagtccgatccgcctcgtgcagaggatgggaagaactgggaggaaaagaaacggaaag
attgtgatgttaatcactgaagggaaggaagaaagagattacaactcaagcgtagcaagt
cgaaaatcgattggcaaagcaatgcacgctggtagtaaatcattgcaatattacccacat
aatccacctatgataccacatggtattaaacctgtttgtcacaaaatgtttataactgtt
aaaaagttgccttccaatacaaaaaagagaaaaatatcgaccgattctcttaattcctac
ttcaaaagtacatcaaaagaatcaaccaagtccttgtttctgtctgctgatgagataatg
gagtggaaaagagatttttatattgagagagatgaattatcacatattccgaaagtatct
tccaactcagcatgcatttatttaaataaagagttcaagtttaagaaacaagaaattgct
ccaaaagttatggtggattggttaccatggcaatgtagactccaaacaactaagcttgtg
gaacattctggaaggaccaaacttttgcatgagatgttaacaagaaatgattcagtcatt
acaatggaaacaaatgatagagaaaaaccaacaaaacaatctgaaccaattattatttca
ccaacactagatattttaccatcaaaagacaatgttcggtctccacacaaacagaacaaa
aactttggcgacataagagaaatattttcaaaagtatcaaaaataaactcaatcaagaaa
atcgcagatatagcaaaactttttacaaatcacattgattttcctgatcggtttataaag
agctcaaattatctccaaaatgctgtcactgactcaaaaccacaaattatctgtgaaaaa
actgttcgtttaaaccataaagattttgataatggtgacaagtttgaaaaatttggtttg
ggtttgtctaaaaatatcccacaagtctctccagtgttagttatggaggaaagtaattct
gtaaaaactgagaaaattattttggaggaaaaacatcaagagttaagtacttctccagtt
acaacgcatatgaactgcccacaaactgttaatactacttctgccatcaccacttcaagc
tcatgtagttttaatttgtttttaagtggtactagtggtggaaaagattgcttagatacc
aatatttcaaatgttaatggtaagagtttgctgccattggtgaagaatcatgcgcactgt
gacagcaatacaacactggatagtcctgatatagaaactcctgattttggttttcctgat
atatttgctcttgatctggacccccctaatgaattaattgaggacaaccctgcagaaaag
aaaccagcagtaaacaaatctctgaaacgaaaatctgactgcatggtggattcctcatgt
atcattccagaaacacaagaggagaatattccacccaacaagctggaccctccctgtaag
aaacttaaagaatcactaaaacatataaaacagatgtccttccatgaacttgaacaaacg
tttgatgtgtctgctgatctatttgacccagaatttcaagttgattttaatttgaccaca
ttagttgactgtacttcttttacgtcaagcccggtggtcagtagtgcgataccaaaacac
tcggtgtgcaacacatctacagagagaaaagctgcgggaaatattacgaccgataaaaaa
gttttaaatggggaaaattatacaagagcttgtcagaattgggaaacaactacggatatt
tgtgataaaatgaaaaacaaagttgcagaagaaacatttgaagatgatgagtcattttta
tctgcgttggttaaaagaaaacaacggaaagcaaaatgtcttgaatctgatgaatccttg
aatgaaactgggaaagcaatctatataacctcaactgacaatatatcagatacagattca
gaaagtttttttcatgttaaaaaggagcaaacaaaatttgatcatcccaggtcagtgtta
ccaatgaatcaaagcttgtttgaaaataaaattcaatgcaacaaacaatcaactccaaaa
ctgctaaagtttcacggaaaagttaaaccaactgtgatgcaaactaaagatcatgcaaag
atgtttatcgacaatgaagcggaagtaagtggtgattgtgacatcacagaagatgatcta
tcactcacagatgaagaaatgttggcttttgtaaatgacgcaacgcaactgactcaacac
atcgatccaaccactgagaaatcacccgatgagaaggcaatgtatcttaaatctctacat
tcaagtgagtggctgaaatgcaagcaaaatgttgaaccacgctacagacgaaatattgag
gttttttcccaggaggtggaaacagattattctaattatttggaagatagttttatcgtg
gagcacgaagattcaaaccctcctgttgaccacggtgaaataactctcttatctcaatta
ccagattactctgctgcgaaagcaaagacacgaaatcaggttaagatgctgaatgtgaaa
aagaaaaaaaagagaaagctcatcgttgattttgattcttga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   RefGene (48)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (63)   

Download RDF
DBGET integrated database retrieval system