KEGG   Ciona intestinalis (yellow sea squirt): 100176937
Entry
100176937         CDS       T01056                                 
Name
(RefSeq) collagen type IV alpha-3-binding protein
  KO
K08283  collagen type IV alpha-3-binding protein
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cin04990]
    100176937
Domain-containing proteins not elsewhere classified [BR:cin04990]
 Pleckstrin homology (PH) domain-containing proteins
  Other PH domain-containing proteins
   100176937
SSDB
Motif
Pfam: START PH PH_8 PH_11 PH_6
Other DBs
NCBI-GeneID: 100176937
NCBI-ProteinID: XP_002129577
Position
3:complement(2290419..2293269)
AA seq 577 aa
MSDSHQSLTDSEEEEEFVTEKFDNPSIKGVLSKWTNYIHGWQDRFVCCQDGTLSYYRAQD
ETAFGCRGSISLTKASTVCHEFDPCRFDIAINDSVWYFRAATENERQEWIEVIEVNKVEG
DNVSLRRHGSLMSLGSAPSITSSSSFRKGRGLKEKLNELETFRDILDRQVDTLQDYFDAC
AQQNQAKDDLESNGEVGEEGDVATNLQNHLSLKSSMSRGIDFKGEAITFKATTNGILNTL
SHCVELINKREEVWQRRLDKERERRKKSEEQYNSSLAAMKKNAFVGSPDYVEGPQSGLTE
EEFYDAVEAELDKQERFTQDIEHSRSMIREAEKQPKRRHKHSDELEKKIQNHLTDSMKPP
GADGDIWELFAEEGEMKIYRKELVEDGLICDPLKAVHSIGNVTAREMCHYFWDTDVRMEW
EGTIESFRVIEVPEEFTTIIYQTHRRVWPSAQRDCLYLSSMVKVDNPPSVGDKIPHDTWI
VCNFSVDHPEANPVSGCVRALIEIALICQTFITPPKDGGPITRDCLQCDIIYVANVNPGG
WAPASVLRSIYKREYPKFLRRFTAYVQDKTRKLDILF
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgtcggacagtcatcaaagcttaaccgactctgaagaagaggaagaatttgtaactgaa
aagtttgataaccccagtattaagggtgtgctgagtaaatggactaattacatacatggt
tggcaagatcgatttgtttgttgccaagatggcacgctatcatactacagagctcaggac
gagacggcgtttggttgccgtggttctattagtctgactaaagcttcaactgtgtgccat
gagtttgatccgtgccgatttgatattgcaatcaatgacagtgtttggtatttccgtgca
gcaactgaaaatgaaagacaggagtggattgaagttattgaagtcaacaaggtggaagga
gataatgttagtttaagaagacatggctccttaatgtcacttggaagtgccccttccatc
acttcaagctcatcctttagaaaaggaagaggcctaaaggaaaagttgaatgaacttgaa
acttttcgtgatattctggacagacaagtggatactttacaagattattttgatgcttgt
gctcaacaaaatcaggccaaagatgatcttgaaagtaatggagaggttggggaggaagga
gatgttgcaaccaacttacaaaatcatctttcgctgaaaagcagcatgtcaagaggtatt
gattttaaaggcgaggcaatcacattcaaagctacaactaacgggattcttaacacgctt
tctcattgcgtggagttaataaataaaagggaagaagtttggcaaagaaggttggataaa
gagcgagaaagaagaaaaaaatctgaggaacaatacaactcctcattggctgccatgaaa
aagaatgcctttgttggaagcccagattatgttgaaggtccacaaagtggacttactgaa
gaagagttttatgatgcggtggaagcagagctggataaacaggagcgatttactcaggat
attgaacattcgcgatcgatgattcgagaagctgaaaagcagccaaagcgccgtcacaag
cattctgatgagcttgaaaagaaaattcaaaatcatcttaccgattcaatgaaacctcct
ggggcagatggcgatatatgggagctttttgcagaagaaggagaaatgaagatttataga
aaggagttggttgaagatggtttgatttgtgaccctttgaaggctgtccacagtattggt
aatgtcacagcacgtgagatgtgccattacttctgggatacagatgtaaggatggagtgg
gaagggacaattgaaagtttccgtgtcattgaagttccagaagaattcacaaccataatc
taccaaactcacagaagagtctggccatctgctcaacgtgattgtttgtatctttcttcc
atggtgaaagtggataatcctcccagtgtaggagacaaaataccccacgacacatggatt
gtttgtaacttctctgttgatcatcctgaagcaaatcccgtctctggatgtgtgagagca
ctcattgaaattgctttaatttgccagacttttataaccccacctaaagatggtggacca
atcacaagggactgtctccagtgtgatattatttatgttgcaaatgtcaacccaggtgga
tgggcacctgcttctgtgttacgctcaatttacaaacgggaatatccaaagtttttgcgc
aggtttactgcttatgttcaagacaaaacaagaaagttagatattttgttctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (144)   
   KEGG ORTHOLOGY (1)   
   RefGene (140)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (158)   

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