KEGG   Ciona intestinalis (yellow sea squirt): 100177129
Entry
100177129         CDS       T01056                                 
Name
(RefSeq) elongation factor 1-alpha, oocyte form
  KO
K03231  elongation factor 1-alpha
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100177129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cin03019]
    100177129
   03016 Transfer RNA biogenesis [BR:cin03016]
    100177129
   03012 Translation factors [BR:cin03012]
    100177129
   04131 Membrane trafficking [BR:cin04131]
    100177129
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cin04147]
    100177129
Messenger RNA biogenesis [BR:cin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     100177129
Transfer RNA biogenesis [BR:cin03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    100177129
Translation factors [BR:cin03012]
 Eukaryotic type
  Elongation factors
   100177129
Membrane trafficking [BR:cin04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    100177129
Exosome [BR:cin04147]
 Exosomal proteins
  Proteins found in most exosomes
   100177129
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4
Other DBs
NCBI-GeneID: 100177129
NCBI-ProteinID: XP_002127060
Ensembl: ENSCING00000007703
Position
Unknown
AA seq 466 aa
MVKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRAIEKFEKEALEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETIRYYITVIDAPGHRDFIKNMITGTSQADCAILIVAAST
GEFEAGVSKNGQTREHALLAYTLGVKQLIVAVNKIDNTEPPYSEDRFTEISKEVSDYVKK
VGYNPKAVPILPVSGFHGDNMLEKSENMPWFKGWKKTLKENNSVINQSGVTLFEALDAIR
PPLRPIGKPLRLPLQDVYKISGIGTVPVGRVETGVLKPGMVVTFAPNNITTEVKSVEMHH
EELKEALPGDNVGFNVKNVSVKDIKRGMVVGNSKTDPPLAASNFLAQAIVLNHPSEIHVG
YAPVLDCHTAHVACKFSELKQKIDRRSGKVLEENPKMVKTGDAAMIVLTPSKPMCVEAFV
DYPPLGRFAVRDMRQTVAVGVIKSVNKAQPSAGKVTKSAQKAVKKK
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggttaaggaaaaacttcatatcaacattgtagtgataggccacgtcgactccggaaag
tcaacgaccactggtcatctaatctacaaatgtgggggcatcgataaaagagcgatcgag
aaattcgaaaaagaagcgttagagatgggtaaaggctcgttcaagtatgcctgggtgttg
gacaaactgaaagcggaacgagaaagaggaatcacaattgatattgcactttggaagttt
gaaacaattaggtattatatcacggttattgatgcacctggtcaccgagatttcatcaaa
aacatgattactggaacatcccaggctgattgcgcaattttaattgttgcagcaagtaca
ggggaatttgaagcaggggtatcaaagaacggccaaacaagggagcacgctctccttgca
tacacacttggtgtgaaacaactgattgtagcagttaacaagatagataacactgaacct
ccgtattctgaggataggtttaccgaaatcagcaaggaagtttccgattacgttaaaaag
gttggatacaatccaaaagcggttccaattcttccggtttctggttttcatggagacaac
atgttggaaaaatcagaaaatatgccgtggtttaaaggatggaaaaagacgttaaaggaa
aataattcggtcatcaaccaatccggggttacactatttgaggctctggatgcaattcgg
ccacccttgagacctattggtaaaccacttcggcttcccctacaagatgtctacaaaatt
agcggcatagggacggttccagttggtcgagtggagactggtgttcttaaaccaggtatg
gtggttacttttgccccgaacaacattacaacagaagtcaagtccgttgaaatgcaccac
gaagaactaaaggaagcacttccgggagacaacgttggtttcaacgttaagaacgtgtcg
gttaaagatataaaacggggtatggtcgttggaaactccaaaacggaccctccattagca
gccagtaacttcttagcacaggccatagtacttaaccatccgagcgagattcatgtaggc
tatgcccccgtgctggactgccacacagctcacgttgcttgcaagtttagtgagttgaag
caaaaaatcgatcgccggtcaggaaaggtactggaagaaaatccaaagatggtaaaaaca
ggtgatgcagctatgatagtgctgacgccgagcaagcctatgtgcgtagaagcgttcgtt
gactaccctcctcttggtcgatttgctgttcgagatatgagacaaactgtggcagttggg
gtgattaaaagtgtcaataaagcgcagcccagtgccggaaaagtaacaaaatctgcacaa
aaagcggttaagaagaaatag

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (82)   
   KEGG ORTHOLOGY (1)   
   RefGene (77)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (97)   

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