KEGG   Ciona intestinalis (yellow sea squirt): 100177402
Entry
100177402         CDS       T01056                                 
Name
(RefSeq) geranylgeranyl transferase type-2 subunit beta
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:cin01006]
    100177402
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100177402
Enzymes [BR:cin01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     100177402
Prenyltransferases [BR:cin01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   100177402
Membrane trafficking [BR:cin04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    100177402
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    100177402
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_C SQHop_cyclase_N
Other DBs
NCBI-GeneID: 100177402
NCBI-ProteinID: XP_002130479
Ensembl: ENSCING00000006632
UniProt: F6U1E2
Position
9:6178178..6182045
AA seq 336 aa
MGSVVKDVALKEDAPQTFLLEKHIEYIAAYGANKEDYEYCMTEYLRLSGIYWGLTAVDLM
HSRNRMNENEIVEFVVSCQKECGGFGPAPAHDPSILYTLSAVQVLCMLDKLDKIHIDKAV
AFIAGLQNKDGSFSGDKWGEVDTRFSFCAVAALSLVGRLWSDCPINIEKCVEFILSCMNF
DGGFGCRPGSESHSGQIYCCVGVLSILRELHHIDDGLLGWWLCERQLPSGGLNGRPEKLP
DVCYSWWVLSSLAILGKLHWIDKHKLKMFILASQDNETGGIADRPGDMVDPFHTLFGIAG
LSLLGETSLKQINPVYCMPQDVLNKLGVNAQILDSQ
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgggctctgttgtgaaagatgtcgcattaaaggaagacgcgccacaaacattcttattg
gagaaacacattgaatatattgctgcgtatggagcaaacaaggaggattatgaatattgc
atgacggaatatttaagactgagtggcatttattggggcttgactgctgtggatcttatg
catagtagaaacagaatgaacgaaaatgaaattgttgagtttgttgtttcgtgtcagaaa
gaatgtggtggttttggtccagcacccgcccatgatccaagtatattgtatacattgagt
gctgtacaggtgttatgtatgttggataaattggacaaaatccacattgacaaagctgtt
gcatttattgctggtttacaaaataaggatggttcgttttctggggataaatggggagaa
gtagacacaagattttccttctgtgctgtggctgctctatcgttagttggccgcttatgg
agtgactgccccatcaacatcgagaagtgcgtggaattcattttgtcgtgtatgaacttt
gatgggggattcggatgcaggcctgggtctgagtcgcactctggacagatatactgctgt
gttggagtgctttcaatattacgtgaacttcatcatattgatgatggtttactggggtgg
tggctttgtgaacgacaactaccatcaggtggtttgaatggtagacctgaaaagttgcca
gatgtttgttactcgtggtgggttctctcatccttagcaatactgggcaagctacactgg
attgataaacacaagttgaaaatgttcattcttgcttcacaagataatgagactggtggt
atcgctgatagaccaggagatatggtggatccatttcacactttgtttggtatagctggt
ttatcattattgggggaaacctcattaaaacaaatcaacccggtgtattgcatgccacaa
gatgtattgaacaaacttggtgttaatgctcaaatactagattcacagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (54)   

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