KEGG   Ciona intestinalis (yellow sea squirt): 100178325
Entry
100178325         CDS       T01056                                 
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2
  KO
K05190  gamma-aminobutyric acid receptor subunit rho
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:cin00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    100178325
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cin04040]
    100178325
Ion channels [BR:cin04040]
 Ligand-gated channels
  GABA-A
   100178325
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb SAM_decarbox
Other DBs
NCBI-GeneID: 100178325
NCBI-ProteinID: XP_002127661
Position
9:complement(3990778..3995133)
AA seq 424 aa
MKTVAIFFIFCCIAVLLVEGRQKGRRKGGNGKSRGGMKVKVDAHGNMLTRQIELMFRQHN
YELSLRPTGKGDRPTHVELALMIESITDISEKNMDLTFTLCMHETWQDRRLQFVGENSNQ
SVVLPSRLIDKLWVPDLYIVGSKSSFTHKTTVDNVVLRIFTDGTILYSLKITTTVACQMS
LYNFPLDMENCTLSFQSLGYSSNELTLHWSSREDSQNLFMDERLVKNMPKFQLLHHQFHS
WNVSMLAMDGFVPMTRCSLSVSFELKRYLLSVFFQSYFPAMAMVLLAGLGMWVDPKSVPA
RVALGVTSVLTISTIIAGLKSSLPKVSYLTAMDIYLWACFLFVFSTVLEYCVLNYMMTQA
GSEKSQVASTAMSLRSCWYRTARRDPSSLDGYFRVGYLITFLVFNVAYWSYYVIATQHEL
VSTE
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgaagacagttgcgattttctttattttctgttgcatcgccgttcttctggtggaagga
agacaaaaaggcagaagaaagggtggaaacggtaaaagtcgcggaggtatgaaggtaaaa
gtcgacgcacatggaaacatgctcacacgccaaatagaactgatgtttaggcaacacaac
tacgagttgagcttacgacccaccgggaagggagaccgtcctacacacgttgagctggca
cttatgattgaaagcataaccgacatatcggaaaagaatatggacttgacctttactctt
tgcatgcacgagacgtggcaagaccgcaggttgcaattcgtgggagagaatagcaaccaa
agcgtggtactgccaagtcgccttatcgataagttgtgggtgccagatttatacatagtc
ggttcaaaaagctctttcactcacaagacaaccgtggataatgtagttctgcgaattttt
accgacgggacgatcctgtacagtttgaaaattactacaactgttgcctgtcaaatgagc
ctgtacaatttccctctggatatggaaaactgcaccctttcttttcagagcttgggttac
agcagcaatgagctgactttacactggtcatctcgcgaagacagtcaaaatctatttatg
gacgaacggctcgtaaagaacatgcccaaatttcaacttttacaccaccagtttcactct
tggaacgtcagcatgctagcaatggacgggtttgtaccaatgacccgctgtagtttgtca
gtcagcttcgagttgaaacgatacctcttatcagtcttctttcaatcctatttcccagca
atggcgatggttctgcttgcagggcttggtatgtgggtcgacccgaaatctgttccagcg
cgggtcgcacttggcgtcacctcagtactcactatctcgactattattgctggccttaaa
tcttccctgccaaaggtttcttacctcacggccatggacatttatttatgggcgtgtttt
ctattcgtgttttcaactgtgttagaatactgtgttctcaattacatgatgacgcaagca
gggagtgaaaaatctcaggtggcatccaccgccatgtcgctgcgctcttgctggtatcga
acagctcggcgcgatccttcttctctcgacggatatttccgtgtcggatacttaataact
ttccttgtgttcaacgtagcgtactggagttattatgtcatagccacgcagcacgaactg
gtgtcaacagaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (78)   
   KEGG ORTHOLOGY (1)   
   RefGene (74)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (89)   

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