KEGG   Ciona intestinalis (yellow sea squirt): 100178924
Entry
100178924         CDS       T01056                                 
Name
(RefSeq) integrator complex subunit 5-like
  KO
K13142  integrator complex subunit 5
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cin03041]
    100178924
Spliceosome [BR:cin03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Integrator complex
    100178924
SSDB
Motif
Pfam: INTS5_C INTS5_N RTP1_C1
Other DBs
NCBI-GeneID: 100178924
NCBI-ProteinID: XP_002120433
Ensembl: ENSCING00000004336
Position
2:complement(6412882..6421921)
AA seq 960 aa
MPVSTGMPANAKPQQSSKQHGALQMVHWFVASCYTSGSFTEERVQSSVMLLRRVPASRHA
VLHRFSALFEEAVRLHLDHMEYQASAQGISPEIAGSLELVIKTLMSLLQENGKAWAPILC
KWSVDSLGEISSCCKQRQVVPSPTDLDSLLQFWLNLIPMRMLLDTYRACIKILIVDNPGC
VDTLLTSSCQHSPYFDWVVADVGAAFPHIVAQRILYSGFDKFCALRFGNIEPSASVSMNE
NEQSVLSSVVRVLEHLVRRNKDKVCSIMLLMYKQSGKVKAGNNTKMRVALYLMQLFSMSN
ILLRSTTVIFLPEIDGASLNNLHQQYESLGSGAAEIETLCSLVVHLVCQSGVGSYQLIRL
ILDAASPRSNPALVGLNTKVQKFFRKIMPSLSSDLQHLALSKGVSPNEDNVFKELEVHYK
DLCKDLLTSSSNERKNWIHTLIVALCLHQHSDIVMKEILIQSTKSSDIECFIKLYNEMYP
VLPGLLGGVLKQSFSSVPQLSNKQSTNLLSSVLYMASSDFLTSAASNFKQKLRKQLVGFI
DNLMTITSHLSSPIPLASLAVQILYLLMTSQSQNEIQLPTRLLPMTRCLVFYFYRLLHAG
HVNNDSSMLHCQQTLTQLAQTPQTFSVVSQFLLEAAVRQNNSILFGRRVEQELDEDVDSS
DPCIEHQISLITLHRKISSNIRTRRQMVGFVPIGVETGLIGSGPKRKKKCPVSKTFQTSS
NECLSLLIYRCCCKTSGGDNLCSIPDVQHVFDADKLIILSERLISSFAASSSYLATAVTL
DGDMEWPVCHMRKFTIERDLKVFHFMDEHPFAWSLLQLIAHNHRALWNITPLIRSCMSVL
ISHFESSRESEVCPTDSLHYLSAVRIVEILGKGQIIPPPLSYCAEIFCLISPYEVYILLV
ILWNFIKEHPPPSDAEHLSNGRDFNKEKLNMQPYLATLHTVIHANITKLGPCAAKFTVLK
NT seq 2883 nt   +upstreamnt  +downstreamnt
atgccagtttctacgggtatgcctgcgaatgcaaagcctcaacaaagtagcaagcaacat
ggtgctttacaaatggttcactggttcgttgcatcttgctatacatctggaagcttcaca
gaagaaagagtccaaagttcggtgatgttgctacgtcgtgtgccagcgtccagacacgca
gtccttcatagattctctgcactctttgaagaagcagtgagacttcatcttgaccacatg
gaataccaagcatcagcacaaggtatcagcccagagattgctggtagtctggagttggta
attaaaactttaatgagtttactacaagagaatggtaaagcatgggctcccattctctgc
aaatggtcagtggattcacttggtgagattagcagttgttgcaaacaacgccaagtagtt
ccatcgccaacagatctcgattcattacttcaattctggttaaatttgattccaatgcga
atgttgctggatacttacagagcttgtatcaaaatattaatagtagacaacccaggatgt
gtggacactcttctcacctcatcatgccagcattccccttactttgactgggtagtagcc
gatgttggagctgcattccctcatattgttgctcaaagaatcctttattctggtttcgat
aaattctgcgctctcagatttggaaacatcgaaccttctgcttctgtttcaatgaatgaa
aatgaacaaagtgttttgtcgtctgttgtgcgagtgttggaacatttggttcgaaggaat
aaggataaagtttgttcaatcatgctgctcatgtacaagcaatctggaaaggttaaagct
ggaaataatacgaagatgagagttgcattatacctcatgcagttgttttcaatgtcaaat
attctactcagatcaactacagttatattccttcctgaaattgatggtgcctcactcaat
aacttacatcaacaatatgagagtttgggatctggagctgctgaaattgaaacgttatgc
agtttagtcgtccatctggtttgtcaatctggtgttgggtcttaccaacttataaggtta
atattggatgctgcaagcccaagaagtaatcctgctttggttggattgaatacaaaagtt
caaaagttcttcaggaaaataatgccttcattatcgagtgatcttcaacacttagcgcta
agcaagggagtttccccaaacgaggacaacgttttcaaagagttggaggttcattataaa
gacttatgtaaagatctgttgacttcttcctctaatgaaagaaagaattggattcacaca
ctcatagttgcgttatgtcttcaccaacattcagatattgtaatgaaagaaattctcatt
cagtcgaccaagtcatcagacattgaatgctttattaaactctataatgagatgtatcca
gtgttgccaggattattaggtggcgtattaaaacaatcattcagctcagttccacaatta
tcaaacaaacaatcaacaaacttactttcaagtgttctatatatggcttcgagtgacttc
ttgacttctgctgcttccaattttaaacaaaaattacgaaaacaactagttggttttatt
gataacctaatgacgatcaccagtcatctatcctcgcccatccccctcgcctcattggct
gtccagattctatacctacttatgacatcacaatcacaaaacgagatacagcttcccaca
cgattgctaccgatgacaagatgtttggtattttacttctacaggctgttgcatgcaggt
catgtcaacaacgactcatctatgcttcactgccaacaaacgctcacacaactcgcacaa
actccacaaactttctcagttgtttcacaatttctactcgaagctgcagtgaggcagaac
aacagcatcctctttggaagaagagttgagcaggagctagatgaggatgtggattccagt
gatccttgtatcgagcaccaaatctccctcatcaccctccacaggaagatatcttccaac
atccggacacggaggcagatggtgggcttcgttcctataggggtcgaaaccggtttaatc
gggagtggaccgaaacgaaagaagaaatgtccggtttcaaagacctttcaaaccagcagc
aacgagtgtttgagcctcctcatatatcgatgttgttgcaaaacaagtgggggcgacaac
ttatgctcaatccccgatgtccagcatgtgtttgatgcagataaactgataattttatca
gagcgacttatttcatcttttgctgcttcgtcttcttatctagccacagctgtaacacta
gatggggacatggagtggcccgtgtgtcacatgcgcaagtttactatagaaagggatctg
aaggtgtttcattttatggatgaacatccttttgcttggagtctcctgcaacttattgcc
cataaccatcgtgccttatggaacataacaccgttgataagatcctgtatgtcggtgctt
atcagccattttgaatcaagtcgtgagagtgaagtctgtccaacggattctctgcattat
ttatctgctgtcagaattgtggagattcttggaaagggacaaataattcctcccccacta
agctactgtgcagagatcttctgtcttatttctccatatgaggtttatattcttttggtg
attctttggaactttataaaggaacatcccccacccagtgatgccgaacatttatccaat
ggaagggactttaataaagaaaagctgaacatgcaaccgtatctggcaacactgcacaca
gtgatacatgcaaatataacaaaacttggtccgtgcgcagcaaaatttacagttttgaag
tga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (53)   

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