KEGG   Ciona intestinalis (yellow sea squirt): 100179215
Entry
100179215         CDS       T01056                                 
Name
(RefSeq) programmed cell death protein 2
  KO
K14801  pre-rRNA-processing protein TSR4
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cin03009]
    100179215
Ribosome biogenesis [BR:cin03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    100179215
SSDB
Motif
Pfam: PDCD2_C zf-MYND
Other DBs
NCBI-GeneID: 100179215
NCBI-ProteinID: XP_002126749
Ensembl: ENSCING00000013304
Position
8:1556775..1560198
AA seq 340 aa
MELGFVEEPENTWRLLRCYFPSKVGGKPAWLDPEHLPSVDDMECGCCHKPLVFLLQLYSP
NDDKLDSFHRTIFVFCCTNGTCYSSENDAFPFKVFRSMLPKENDYYPADPPDYDEPNAIR
ECSQFTNLCGLCGNHGVKKCSRCREVQYCSKDHQVFHWKLLHKYQCSKPKDENNEVEMEK
SILFSEKELVIEPEPTAPKKENTESEFENLKNHIQSGDYTEEELNDAVANVKSDKAFEKF
QKQIAVEPEQVIRYQREGSVLWCSSENIPSKIPSCECGAQRQFEFQIMPQLLNHLKVDHS
IEGPTIDWGTVAIYTCHDDCNISPYIKEYCWLQHFSKEAI
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggagttgggatttgtagaagagcctgaaaatacatggcgactgctgcgttgttacttc
cccagtaaagttggtgggaagccagcgtggttggatcccgaacatttaccttcagtagat
gacatggaatgtgggtgctgccacaaaccgttggtgtttctacttcaactgtattcccca
aatgatgacaagttagattctttccatcgcacaatatttgtcttctgctgcaccaacggg
acatgctacagcagtgaaaatgacgcttttcctttcaaagtgtttcggtccatgttacca
aaagagaatgattattaccctgctgatccaccagattatgatgaaccaaatgccatcaga
gaatgttcgcagttcacaaatttgtgtgggttgtgtggcaaccatggtgtgaagaaatgt
tcgcgctgtagagaagttcaatactgttcgaaagatcatcaagtttttcattggaagtta
ttacataagtatcaatgcagtaaaccaaaggatgaaaataatgaagttgaaatggaaaaa
tcgatcctgttttcagaaaaagaattggtgattgaacctgagcctacagcacccaagaag
gaaaatactgaaagcgaatttgaaaatttaaaaaatcacattcaatctggtgattacaca
gaagaagaacttaatgatgcggtcgcaaatgtcaaatcggacaaagcgtttgagaagttc
caaaaacaaattgctgtggagcctgaacaagtgatcagataccagagagaaggaagcgtg
ttatggtgttcaagtgagaatattcctagtaaaataccttcgtgtgaatgtggggcacaa
cggcagtttgaatttcagatcatgccccaattactaaaccacttgaaagttgaccattct
attgaaggtccgaccattgactggggtacagtggccatatatacatgtcatgacgattgt
aatatttcaccttatataaaggaatactgttggctgcaacacttttctaaagaagcgatt
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (72)   
   KEGG ORTHOLOGY (1)   
   RefGene (67)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (83)   

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