KEGG   Ciona intestinalis (yellow sea squirt): 100180497
Entry
100180497         CDS       T01056                                 
Symbol
nachr
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2-like precursor
  KO
K04813  nicotinic acetylcholine receptor beta-2
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:cin00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    100180497 (nachr)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cin04040]
    100180497 (nachr)
Ion channels [BR:cin04040]
 Ligand-gated channels
  Acetylcholine (nicotinic)
   100180497 (nachr)
SSDB
Motif
Pfam: Neur_chan_memb Neur_chan_LBD DUF2417
Other DBs
NCBI-GeneID: 100180497
NCBI-ProteinID: NP_001265876
Ensembl: ENSCING00000002138
UniProt: E7FIY9
AA seq 451 aa
MGSRCWLIAVCLCYVIRECLSAHAEEKLLRHLLDPVRYNKLIRPSESITSKVDVHFDLII
SQLIGINEREQYMITKVWLPQVWVDKRLSWQPMRYENITKVQLPSNMIWLPDVVLYNNAD
GMYEVSLQSNAIILNNGTVTWMPPAIYKSACKIKVRHFPFDEQNCTMMFRSWTYNRLDIE
LKLKNPNATLDDFTPSGEWDILQTPGSVNVNPNDETYQDLLYSLIIRRKPLFYTINLIIP
CILITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGKYLMFT
MMLVTLSIVASVCVLNIHHRSPSTHTMPPWICTIFLNHLPPLLGMERPGTDDRCRCKVND
ATYGVDVTELSGSDVIRNRKRGKSEVKLPRDVSSALEGVKFIADHLRAEDENKNVHEDWK
YVAMVIDRMFLFVFVGVCAIGTIGIFIQPFV
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgggttcgcgatgttggcttatcgctgtgtgcctgtgttacgtcataagagagtgtcta
agcgcgcacgccgaagagaaattgttacgtcatttattggatcctgtccgttataacaag
ttgattcgaccaagcgaatccatcacaagcaaagttgatgttcattttgatctcatcatc
tcacaacttatcgggatcaatgagcgggaacaatacatgataacgaaggtatggctccct
caagtgtgggttgataaacggttgtcatggcaaccgatgaggtacgagaacataacgaag
gtacaactcccatccaacatgatatggttgccggatgttgtgctgtacaacaatgctgat
gggatgtatgaggtctccctacaatccaacgcaataatactcaataatggaactgtcacg
tggatgccgcctgctatttataagagcgcttgtaaaataaaagttcgacattttccattt
gacgaacagaactgcacaatgatgtttcggtcgtggacgtacaacaggttagacattgag
ttgaagttaaagaacccgaacgcgacactcgacgactttacccctagtggtgagtgggat
atcctgcaaacccccgggtcggttaacgtaaaccccaacgatgaaacgtaccaggatcta
ttatatagtttaattatccgtcgcaagccgttgttctacaccatcaaccttatcatcccc
tgtatattgataacatcgctagccatccttgtattctatctaccttccgattgtggggag
aagatgacgttatgtatatcggttctcctcgctcttactgtgttcctcctccttatatcg
aagatcgttcctccaacatccctcgatgtcccgctgattggtaaatacctgatgtttaca
atgatgttggtgacattatccatcgttgcatcggtgtgcgtgctaaacatccaccatcga
tcgccatcaacgcacacgatgcctccgtggatctgtaccattttcctcaaccatcttccc
ccactacttgggatggaacgaccggggacggatgatcgatgtagatgcaaggttaacgac
gcaacatacggagtcgacgtaaccgaattatcaggaagtgatgtcataaggaatcgtaaa
cgaggtaaatccgaggtgaaattaccgcgcgatgtaagttcggcactagagggagtcaag
ttcattgctgaccacttgagggccgaagacgaaaataaaaatgtccacgaagattggaaa
tacgttgccatggtgatcgaccgaatgtttttgttcgtgttcgttggggtttgcgcgatc
ggaacgatcggaatattcattcaaccttttgtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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