KEGG   Ciona intestinalis (yellow sea squirt): 100181100
Entry
100181100         CDS       T01056                                 
Name
(RefSeq) D-glucuronyl C5-epimerase B isoform X1
  KO
K01793  heparosan-N-sulfate-glucuronate 5-epimerase [EC:5.1.3.17]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin00534  Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cin01100  Metabolic pathways
Module
cin_M00059  Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:cin00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
    100181100
Enzymes [BR:cin01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.17  heparosan-N-sulfate-glucuronate 5-epimerase
     100181100
SSDB
Motif
Pfam: C5-epim_C Glce_b_sandwich DUF2140
Other DBs
NCBI-GeneID: 100181100
NCBI-ProteinID: XP_002131988
Ensembl: ENSCING00000021430 ENSCING00000023180
Position
11:3682135..3686302
AA seq 637 aa
MLRQLLRYMRNVVFIRKYIFLLFASSILFFGFIFYQNNQTQCEHIPVGIKPKSMDKNLSK
DQLNQLKQQWLNELKKSQALSGPDEPPRNDLKPSVSAIECLINDEETVQCLKSSDSNAQI
YMPFDFIQNYFDVYGKMKHYDGYDRFEFQQSNAKVVYDPKSPYTYTGVFMTFDSYNVEAR
ERVKCISGITGVPLSTQWHIEGYYYGIQIAQFGMSHYSKHMTQKPPTKQVYENAEGSVQS
RWSSSNKYCLVENEEDKERNSRVIKFSTPDSIPLGSGASLVLGNTMEFILSFDLKMVANG
SLSVVLETNDKMKQYTIHYITNSLVIDYDLKSNIYYGIGPSRTWRHMARDLLTDLKKGIG
LTTKKQAKKVRIAIQKVSRLIVRGRGYIDNVTLSTSEHLTQFFDASQWMYLNQDKKTGGW
KNDVERRLEGYPPIPAGWISAMGQGQGMSVLSRAYHVFHDPKYIVALSHALQPFTKSSEQ
GGVRATFLKTYTWYEEYPTKPSSFVLNGFMYSLIGLYDFKSLLEHEFGFGSNEQPPKVSL
QISSVDLPATYKLVKQLYHDGMTSLKAMLPLYDGGSRTFYDLRHFILGMPPNVARWDYHT
THLSQLVLLYSVSNEPVLKKYFDNWSGYLRGKVAKHN
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgcttcggcagttattgcgctacatgagaaatgttgtgtttatccggaaatatatattc
ctactttttgccagttcaattctctttttcgggtttattttctatcaaaataaccaaaca
caatgcgaacatatacctgtgggtataaaacctaaaagcatggacaagaatttatccaaa
gaccagttaaatcaattgaaacagcagtggttaaatgaactgaaaaagtctcaagcttta
tcgggtcccgacgaacccccaagaaatgatttaaagccctcagtttccgccatagagtgt
ttaataaatgatgaagaaactgtccagtgtttaaaaagctctgattcaaatgctcaaatt
tacatgccatttgatttcattcaaaattatttcgatgtttatggaaaaatgaaacattat
gatggttatgatagatttgaatttcaacaaagcaatgccaaggttgtctatgatccaaag
agcccatacacgtacacaggtgtcttcatgactttcgattcatataatgttgaagcaaga
gagcgtgtcaagtgtatatcagggattacaggggtaccattatcaacgcagtggcacatt
gaaggttactattatggaatccagattgctcagtttggcatgagtcactacagcaaacac
atgacacaaaagccaccaaccaaacaagtttatgaaaatgcagagggttctgtccagtct
cggtggtcctccagtaataaatactgtttggttgaaaacgaagaagataaagaaaggaat
tctcgagttattaaattcagcactccagattctattccattgggaagtggggcctccctt
gttcttggcaacaccatggagtttatcttgtcgtttgatttaaaaatggttgcaaatggt
tccttatctgttgtcttggaaaccaatgacaaaatgaaacaatatacaattcattacatc
acaaacagtttggtcattgattatgatttgaaatcaaatatatattacggaatcggtcca
agtcgtacttggagacatatggcaagggatttgttgacagatttgaaaaaaggtattggt
cttacaactaaaaaacaagcaaagaaagttagaattgccattcaaaaggtttcaaggctt
attgtaaggggtcgtggttatattgataatgtgacactctccacgtctgaacacttgacc
caattttttgatgcaagccaatggatgtatttaaaccaagacaagaagactggagggtgg
aaaaatgatgttgagcgaagactagagggctatccaccaattcccgctggttggatatca
gccatgggtcaggggcaagggatgtctgtattatcaagagcctaccatgtcttccatgac
cctaaatatatagttgctctcagtcatgctttacagccgtttaccaaatcttctgagcaa
gggggtgtgcgtgctacttttttaaaaacgtacacctggtatgaagaatatccaaccaaa
ccaagttcattcgtacttaatggttttatgtattcccttattggtctgtatgactttaaa
tcgctcttagaacatgaatttggttttggttcaaatgagcaacctcccaaagtgagtctg
cagattagttctgttgatcttccagccacttacaaacttgtgaagcagttgtaccacgat
ggcatgacatctttaaaagcaatgcttcctttatatgatggtgggtcacgtacattctat
gatctacgacactttattttaggcatgccgcccaacgtagcaagatgggactaccacacc
acccacctaagtcagcttgttctgctttactctgtttcaaatgagccggtgcttaaaaag
tattttgataactggtcaggttacctgaggggtaaagtagcaaaacacaactga

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