KEGG   Ciona intestinalis (yellow sea squirt): 100181643
Entry
100181643         CDS       T01056                                 
Name
(RefSeq) poly(A) RNA polymerase gld-2 isoform X1
  KO
K14079  poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cin03019]
    100181643
Enzymes [BR:cin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     100181643
Messenger RNA biogenesis [BR:cin03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     100181643
SSDB
Motif
Pfam: PAP_assoc NTP_transf_2 DUF4965 TUTase Polbeta
Other DBs
NCBI-GeneID: 100181643
NCBI-ProteinID: XP_002126682
Ensembl: ENSCING00000001767
UniProt: F7A3V9
Position
1:complement(6658247..6664405)
AA seq 713 aa
MSNRWHPYNDNHFDSLQSNSRVEYPHNERQHYTQQAIFYSRMRQQRNGCHQTHHRPNQPI
YHHDHNSYDDFTRSTRALPRRLLIHRHYDKPSHSRQVYKELPQTLRRDAVNNKRPISSSY
NNVPEKKRRIAHQQTNEAKSSQKDKPTTSRSVSPIPTQTVKTNPVTSTNVTSSPVIFVKE
YNKNKITVHDSIVIISDSENECDESHEGLNKSVASTSCAEPVNEENVSTGETNQACCSSN
QCDDDDPTLSPMLGSVRDKFFSAETSDSNCEDLPSTSEPVFESTVPLLQTTDQTPTQDQN
EGCENVNSTLPSKKTTSLNKQPTKTVTPTSRVPVKQRLGKASNTSTSNVNKDTSLTSDQL
QNFNMKIFGLTPVEIQTFFQNDKLSRQIYQFMMTNQQRSNFLQQKLRLAKALQDAIVYAM
LPDAKVFLVGSSVNGFGRLNSDADLCLVFDPRNKTVNRKTVLKMLNRMKQLLNNAHFVKN
LQLIYATVPILKFEDRISGMECDLNVNNLTGIRNSFLLLAYARCDPRVRPMVLCIKEWAH
VNNINSAQLGTLSSYALVLMVLHYLQIVKPRVIPSFQALHKDNFSSNLPIHCLGEKVASL
PMFYSNNTSPVSQLLKGWFNYFSTFDFANKVISVRLGTSYNVHTMSNSKAWLKKCVKIEE
PFDQTNVARAVQSGKQFSQIITSIRNADIALRNDNLKTIIPCLAPSYNIRCFN
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgagcaaccgatggcatccttataatgacaaccattttgatagtctgcaaagtaacagt
agggtggaatatccacataatgaacgacaacattacacacagcaggcaattttttattca
agaatgagacaacagagaaatggatgtcaccaaactcaccatcgaccaaaccaacctatt
tatcatcatgaccacaattcctatgatgattttaccagatcaacgagggcattgcctcgt
cgattactaatacatagacattatgataaaccctcacattcaagacaggtctataaagag
ctgcctcaaactttaagaagagatgctgtgaacaacaaaaggcctatcagtagttcttac
aataatgtacctgaaaaaaagaggcgtatcgcacatcaacagacaaatgaagcaaaaagt
tcacagaaagataagcccaccacatcacgatcggtttctcctattccaactcaaactgtt
aaaacaaatcctgtcacttccactaatgtaacatcaagtccagttatctttgttaaagaa
tacaacaaaaacaagataacagtacatgattccattgtaatcatcagcgattccgaaaac
gaatgtgatgagagccatgaaggtttgaacaagagtgtagcatcaaccagttgtgcagaa
cctgtgaatgaagagaatgtttctacaggtgaaacaaaccaagcttgttgtagctctaat
cagtgtgatgatgatgatccaactttatctcctatgcttggttccgtgagggacaagttt
ttttctgctgaaacatcagactccaactgtgaggatttaccttctacgagtgaacctgtg
tttgagagcacagtacctctgctgcaaaccacagatcaaactcctactcaagatcaaaat
gaagggtgtgaaaatgtaaactcaacactgccatctaaaaaaaccactagtttgaacaaa
cagccaacaaagacggtgaccccaacttcaagggtccctgttaagcaaagacttggtaaa
gcatccaacacaagcacttcaaatgttaataaggatacaagtctaacaagtgatcaacta
caaaactttaatatgaaaatatttggattaacaccagttgaaattcaaacattttttcaa
aacgacaaattgtctcgtcaaatctatcagtttatgatgaccaatcaacagagatcaaat
ttcttgcagcaaaaattaaggcttgcaaaggcacttcaagatgccattgtttatgcaatg
cttcctgatgctaaggtgtttctagttggttcctctgtcaatggatttggtcgattaaac
tcggatgccgatctctgtttagtgtttgaccctaggaacaaaactgtgaaccggaaaacc
gttttgaaaatgttgaatcgtatgaagcaattgttaaataatgctcactttgtgaaaaat
ctgcaactaatctatgcaacggtcccgattctgaagtttgaagacagaatcagtggaatg
gaatgtgatctgaatgtcaacaacttgactggaatcaggaattcatttttacttcttgct
tatgctagatgtgatcccagagtcagacctatggtactttgcatcaaagaatgggcccat
gtcaataatataaatagtgcacaacttggtacattgagcagttacgctttggtgctcatg
gtactgcattaccttcagattgttaagcctcgagtcataccaagttttcaagccttgcac
aaagacaacttttcctccaacttaccgattcattgtcttggtgaaaaagtagcgagtcta
ccaatgttttattccaacaacacatcgccagtatcccaactattgaaaggatggttcaac
tacttttcaacgtttgattttgctaacaaagtgatatcagtccgtcttggcacgagttac
aacgttcatacaatgtcaaattcaaaagcttggttgaaaaaatgtgtgaaaatagaagaa
ccatttgatcaaacaaatgtagcaagagctgttcaatctggaaaacaatttagtcaaatt
attacatcaatcaggaatgcagatattgctttgagaaacgataatcttaaaactattatt
ccatgccttgcaccttcctataatattcgatgcttcaattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (59)   
   KEGG ORTHOLOGY (1)   
   RefGene (54)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (76)   

Download RDF
DBGET integrated database retrieval system