KEGG   Ciona intestinalis (yellow sea squirt): 100182788
Entry
100182788         CDS       T01056                                 
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X2
  KO
K00731  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:2.4.1.122]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin00512  Mucin type O-glycan biosynthesis
cin00514  Other types of O-glycan biosynthesis
cin01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cin00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00512 Mucin type O-glycan biosynthesis
    100182788
   00514 Other types of O-glycan biosynthesis
    100182788
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:cin01003]
    100182788
Enzymes [BR:cin01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.122  N-acetylgalactosaminide beta-1,3-galactosyltransferase
     100182788
Glycosyltransferases [BR:cin01003]
 Glycan extension
  Type 3 chain
   100182788
SSDB
Motif
Pfam: Fringe Galactosyl_T
Other DBs
NCBI-GeneID: 100182788
NCBI-ProteinID: XP_018669470
Position
11:complement(591584..596752)
AA seq 314 aa
MRRNEFLLFICGLVIGGLIAVTLHKYSDTSLRPVRSPEVSQYNFVSTRTETTTCESTAKN
ISNVRVLCWVMTSPMTLFTKAVHVRDTWGRRCDKILFMSSEDNEKLPAIGLGVKEGREHL
YDKTAAAFQYIWTHHKDEADWFLKADDDTYVIIENLKLLLKDHDPYLPMYFGRKFTPMVK
QGYMSGGAGYVLSKAALSRFDRATRTQRCIPLDSNEDLEIGRCMQHIGVKTMDSRDPEKK
ETFFPFSPALHILPGNIPKDSWYWKYIAHPNPSGPGCCSKHMISFHYVQPDMMHIIHHFI
YRMEAYGVKAQSYV
NT seq 945 nt   +upstreamnt  +downstreamnt
atgcgaagaaacgagtttctgttatttatctgcggtcttgtaataggagggttgattgcg
gtaactttacataaatacagtgatacaagtttaaggccagttcgatcaccagaagtatca
caatataatttcgtgtcaacaagaacagaaactacaacatgcgaatcgacagcaaaaaac
atcagcaatgttcgtgtcttgtgctgggtgatgacatcaccgatgacgttgtttacgaaa
gctgtgcatgtgagggatacttgggggagaagatgtgataaaatattgttcatgagctcg
gaagataacgagaaattgccagctatcgggttaggcgtaaaggaaggtagggaacatctt
tatgataaaacagcagctgcgtttcagtatatttggacgcatcataaagatgaagcggat
tggttcctcaaagctgatgatgatacttatgttataattgaaaatttaaagttgttgtta
aaggaccacgacccatacttgcccatgtattttggtcgtaagtttacaccaatggttaaa
caaggttacatgagcgggggggctggttatgtattgagtaaagctgcactaagtagattt
gatcgcgcaactcgtacacaaagatgtatcccccttgattctaatgaagatttagaaatt
ggtcgatgtatgcaacacattggggtaaaaaccatggattcgagagatccagagaagaag
gaaaccttttttcctttctctcctgcattgcatatcttaccaggaaacataccaaaagat
agctggtattggaagtacatagctcaccccaacccttctggtcccggatgttgctctaaa
catatgatttcgtttcattacgtacaaccagatatgatgcacataatacatcactttata
taccgtatggaggcgtatggtgtcaaagctcaaagttacgtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

Download RDF
DBGET integrated database retrieval system