KEGG   Ciona intestinalis (yellow sea squirt): 100183448
Entry
100183448         CDS       T01056                                 
Name
(RefSeq) hemicentin-1-like
  KO
K06491  neural cell adhesion molecule
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03265  Virion - Ebolavirus and Lyssavirus
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03265 Virion - Ebolavirus and Lyssavirus
    100183448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100183448
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cin04515]
    100183448
   04090 CD molecules [BR:cin04090]
    100183448
   00536 Glycosaminoglycan binding proteins [BR:cin00536]
    100183448
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cin00537]
    100183448
Membrane trafficking [BR:cin04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    100183448
Cell adhesion molecules [BR:cin04515]
 Immunoglobulin superfamily
  NCAM1/2
   100183448
CD molecules [BR:cin04090]
 Proteins
  100183448
Glycosaminoglycan binding proteins [BR:cin00536]
 Heparan sulfate / Heparin
  Adhesion molecules of cell surface
   100183448
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cin00537]
 Others
  100183448
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 V-set C2-set_2 Adeno_E3_CR1 C1-set
Other DBs
NCBI-GeneID: 100183448
NCBI-ProteinID: XP_026692254
Position
10:309652..318904
AA seq 592 aa
MASQFTIQPDNAKGTIANKDLLMTCQYPSYFKSVRWLGLDKQVITNMTKGVKLDKDGRRR
ELYLTLVNVSSDMNGMYTCEGYDTAINQTVAETRIVTVFEPIGFVNPKTEQTFELGQTVS
VICQVSGNPPPSVVWKQGTQSLEGTPENSRIYQDLDTNNLIIKNITKKDEGKYTCLAREL
SKGQTRNLPVFVDVQCINMLYLVGPAGIQVPKMVTGVQGGDVTLTCNATGEPEPMYKWYF
GDGMTFTNSTLVKDGVSEDGKVLIVSNVTAGDAGKYTCIAKNIHGTDSDTTDVIINVPPT
ISIILGDSVVEGDNARIGCSATGIPTPVVTIFRHGVALNSSQLSETTPMTVEYNSGEAQI
RFTPSSYADSGDYTCIASNSAGNIEGVIKLDIQYAPRETTLPEVYACLNEKAELSCIFDA
NPKPTLTWGRMLPVAAADDDFLAVFTSNQSVGVTPDEAEVTMTFTPIVPDDNLSVQDQGG
VLMLKISEVNEESYGKYYCRARNEHGEQTAVGELMMAMKSSKPLNVEVVDASTRQANVIF
SPPSNIVSQISRYLISLSSGSQLVLEDEIAAGSLPAAHWLTAGQSRGSAPLI
NT seq 1779 nt   +upstreamnt  +downstreamnt
atggcaagtcaatttaccattcaacctgacaatgcaaaaggcaccatcgctaacaaggac
cttctcatgacttgccaatatccaagttacttcaaatcggttcggtggttagggctggac
aagcaagttatcaccaatatgaccaagggggttaaacttgataaagatggtcgccgacga
gagctttaccttacattggtgaatgtatcttctgatatgaatgggatgtacacatgtgaa
ggatatgatacagccatcaatcaaactgtggcagaaacaaggatagtaactgtctttgaa
ccaattggtttcgtgaacccaaagactgagcagacatttgaacttggccaaacagtgtct
gttatatgccaggtgtctggtaatcctccaccaagtgtggtttggaaacaaggaacacaa
agtcttgaagggactcctgagaatagtcgcatctaccaagacctagataccaacaacttg
attatcaagaacatcactaaaaaagatgaaggaaaatacacttgtttggcaagggagctt
tctaaaggacaaacacgcaacttgccagtatttgttgatgtacaatgtattaacatgctg
tatttagttggacctgctggaatacaagtacctaagatggtgacaggagtacaaggaggg
gacgtgacactcacatgcaatgcaactggtgaacctgaaccaatgtataaatggtacttt
ggcgatggaatgacattcaccaactccacccttgtaaaggatggcgtcagtgaggatggg
aaagtccttatagtttccaatgtaacagcaggcgatgccggcaaatatacttgtattgca
aagaacattcatggaactgacagtgacacaacagatgtcattattaatgttccaccaacc
atcagtataatattgggggattctgtagttgagggagacaatgcaagaattggttgttca
gcaactggtatccctacgcctgttgtcaccatcttcagacatggagtggcgttgaacagc
tcgcagttaagtgaaaccaccccgatgacagttgaatacaacagtggagaagctcagatt
cgtttcaccccatcttcatatgccgatagtggagattatacttgtattgcttctaattca
gctggaaacattgaaggagttattaagctggatattcaatatgctccacgtgagacgact
cttccagaagtttacgcttgtttgaacgagaaagccgaactttcttgtatattcgacgca
aaccccaaacccaccctcacttggggtagaatgttacctgttgctgctgcggatgacgat
tttcttgccgtcttcacgagcaaccaatctgttggagtaactcccgatgaagctgaagtg
acgatgacgtttactcccattgttcccgatgacaacctcagtgttcaagatcaaggaggt
gtcttgatgcttaagataagcgaagtgaatgaggaatcatacggtaaatattattgtcga
gcacgtaacgaacatggggaacaaactgctgttggtgagctgatgatggcaatgaagtct
tccaaaccacttaatgtggaggtggtcgacgcatccaccaggcaagcgaacgtgatattc
tccccaccctccaacattgtgtcgcaaatctccagatacctcatttctctctcctctggg
agccaactcgtcctcgaggatgaaatcgccgcaggttcgttgccagctgctcattggtta
acagccggccaatcccgtggttccgcaccactaatttga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (39)   

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