KEGG   Ciona intestinalis (yellow sea squirt): 100183632
Entry
100183632         CDS       T01056                                 
Name
(RefSeq) sortilin
  KO
K12388  sortilin
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04142  Lysosome
Brite
KEGG Orthology (KO) [BR:cin00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    100183632
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR BNR_6 Reelin_subrepeat-B MAM
Other DBs
NCBI-GeneID: 100183632
NCBI-ProteinID: XP_009862463
Position
1:complement(7656712..7671700)
AA seq 835 aa
MLGLRLSLILITLLPSLAISTQNLVYEFEKSHSINKRSSEEEDQTSSLHKRDTTSSTCVP
PADFVNKLTPGRTQHKFTQDTNPSISLTWSGSDGVILGLTTMTSMFVSQASKLYRSHDRG
KTFEDISSRIDHGYIRKSGGMQVNPTDTNMVILFGYDPPFSTSRHTTIYTTNDAGLTFSK
ILLPFKIDVSSIKFNAHNKHRLLAQSVSHGELWLSSDFGSSWKLVQSYVQTISWDPTDGD
YFYFTYDPSQSMSKNSITNELYRENAITEVSVRLAQDVHSFAVQDTFLFLSVQFQGKNGS
RVMHVSKNHGDSWDAAQLPLINRKQFYSLLDMSEDMVFIHVDVEGDTGFGTIYTSDERGI
IFSKSLSNHLYPNNKGITDFYKVLSLPGVYITSQLSEDKTVHSLITFDKGGTWNTLTAPA
GSKCAATEKACNLQLHNYFSASKHVALPALPLSSKNTVGLIIAHGNIGDGLNFNPPKVYV
SDDGGYSWSQPPQLDGPHYYGIGDRGGLLWAIPSQSTPTNIIKFSLDEGQCWHSFNFSDT
PIQITGVSPEQGEKTTDLTIWGWDRNGDGMWMVVTVDFKAVMGSQCTRDDYMKWIAHETN
TLASLNDNCLLGSKQSFIRRKKGTICTNSNALQAIPTHETCSCRNLDYLCDYGYTRSTDG
RTCVRDTSASNTNMDVCIEGTEEVILTKGYRKIPGDKCQGGFNPNHQVESLKKSCARTEE
VKDNFGVDKDFFVDYVKPHSNPHTGWIIFLVIVVLALGGALVYLVYKKRSLLMKVRYRPI
TQEVPDDSANTRLVGTATIMDDDEAVLVEMPNGGPPKNGAIISYHDDSDEDLLVT
NT seq 2508 nt   +upstreamnt  +downstreamnt
atgttaggtttaagattatcgttaattttaataacgttgttgccatctttggcaatatca
acgcaaaatttggtttatgagtttgaaaaatctcactcaataaataaaagaagttcggaa
gaagaagatcagacttcatctttgcataagagagatacaacttcaagcacttgtgtacca
cccgcggattttgtaaacaagcttacacccggtcgtacccagcacaaattcacgcaagat
acaaatccttcaatttccctgacatggtctggtagtgatggagttattctcggtctaact
acaatgaccagcatgtttgtatctcaagcttcaaaactatacagaagccatgatcgtgga
aaaacttttgaagacatatcctctcgtattgaccatggttacatacgcaaatctggtggt
atgcaagtcaacccaactgatacaaacatggtgattttgtttggatacgaccctccgttt
tccacctcccgacacactactatatacacaaccaatgatgcgggcttgacattcagtaaa
attctccttccctttaaaattgatgtttcttcaattaagtttaatgcgcataataaacac
agactgcttgcccaatctgtaagccatggtgaattatggttgtcttcagactttggaagc
tcgtggaaattagttcaaagttacgttcaaactatatcctgggacccaactgatggcgat
tatttttacttcacttatgacccaagtcaatctatgtctaagaacagtatcaccaatgag
ctgtacagagagaatgcaattactgaagtatcagtacgtttagcacaagatgttcatagc
tttgctgtacaagacacttttctctttctatctgtgcaatttcaagggaaaaacggcagt
cgtgtaatgcatgtgtcaaaaaaccacggcgattcatgggatgctgcacaacttccactt
attaaccgaaagcaattctattccctccttgacatgagtgaagatatggtgtttattcat
gtggatgtagagggtgacactggttttggaaccatatatacttctgatgagcggggaatt
atattttcaaagtcactttcaaatcatctttacccaaacaataaaggaatcacagatttt
tacaaggttttatccctgcctggtgtgtatatcacgtcccaactaagtgaggacaaaacc
gttcattccttaattacattcgataaaggaggaacttggaacacacttacagcacctgcg
ggtagtaaatgtgcagcaacagaaaaagcttgcaaccttcaactccataattacttcagc
gcttcaaagcatgttgctctacctgccttaccactatccagcaagaacaccgttggatta
attattgcccatggaaacataggtgatggtttaaatttcaacccacccaaagtttatgtg
agtgacgatggtggttactcgtggtcacaacctccgcaacttgatggacctcattactat
gggataggggatagagggggtctgttgtgggccatcccatcacaatctacaccaacgaat
attataaagttttcattagatgaaggccaatgttggcattcatttaatttttctgacacc
ccaattcaaataaccggggtttcccccgaacaaggagagaaaacgaccgacctaacaata
tggggttgggatagaaatggagacggaatgtggatggttgtaactgtggatttcaaagca
gttatggggtctcaatgtaccagagatgattacatgaagtggattgcccatgaaaccaac
acgcttgccagccttaatgataattgtttgcttgggtcaaaacaatcttttattcgaagg
aaaaaaggaaccatttgtacgaacagtaacgctctgcaagcgattccaacccatgagaca
tgctcgtgtcgtaatttggactatttatgtgattatggctacacacgaagtactgatggt
cgaacatgtgtacgcgatacatcggcttcgaacacaaacatggatgtttgtattgaagga
acggaagaagtcattctgacaaagggttatcgtaaaataccaggtgataaatgccaaggt
ggattcaatccaaatcaccaagttgaatctctgaagaaaagttgcgcaagaactgaagaa
gtgaaagataactttggagtggataaagattttttcgttgattacgttaaacctcactct
aatcctcacactggttggatcatatttctcgtcattgtggttctcgcactaggaggcgct
ctcgtgtatctcgtttataagaaacgaagccttttaatgaaagttcgatatcgaccaatc
acacaagaggttcccgatgactcagcaaacacacgattagttggcacggcaaccatcatg
gatgatgacgaagcagttttggttgaaatgccaaatggcggacctccgaaaaatggcgcc
attatttcttaccatgacgattcagatgaggatcttcttgtaacgtga

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (111)   
   KEGG ORTHOLOGY (1)   
   RefGene (107)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (126)   

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