KEGG   Ciona intestinalis (yellow sea squirt): 100183670
Entry
100183670         CDS       T01056                                 
Name
(RefSeq) alkylated DNA repair protein alkB homolog 8-like
  KO
K10770  alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cin03016]
    100183670
Enzymes [BR:cin01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.229  tRNA (carboxymethyluridine34-5-O)-methyltransferase
     100183670
Transfer RNA biogenesis [BR:cin03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    100183670
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 Methyltransf_11 Methyltransf_25 Methyltransf_12 Methyltransf_31 Methyltransf_23 Ubie_methyltran Methyltransf_8 RRM_1 MetW Methyltransf_9 PCMT
Other DBs
NCBI-GeneID: 100183670
NCBI-ProteinID: XP_002120174
Ensembl: ENSCING00000009639
Position
5:754957..757099
AA seq 593 aa
MSEALKKRQEKKKRKICAKLQAYGLQIDCNPTSTVVIANAGIGNMVCSTELTHLVSQYGD
CILLKLDGKSYAVVQYKNTESAKYAAESLEGHQMVKQTKNEFATFYCFYLNNIPQEDVIF
AEEKSDLPNGLIKIENFLNKEEEQALINCIQHDISILSNDHVSEKLKHRTVLHYGYKFRY
GTNDVDINNPISEGLPNYIENLLDRIMATGYLPSRPDQLTINMYEPGDGIPPHTDNTRSF
DGVLSTVSLGSHTVMNFSKEGAERIDVCVEPRTLFLFTGESRYEWRHGIQQRKFDILDQG
KKITTRTIRYSLTFRTVVKDAGKSGCTQKEEFLIPENESDANSLESSHVHSVYDKIADHF
SSTREKPWPHVVEFLQSLPRASVVLDVGCGSGRYLGVCQQHFMLGCDRSVSLINICKQKN
FPSFVCNGLKLPVREGSFDACICIAVIHHYATEKRRIQAIKELLRAVRIGGKILIYAWAI
EQTCNNVKSKYLKKNAVTSNQEHIESDVSSPKDGKQKLAVHVNRTLFVQQDLLVPWKSKN
VNSKSNNSCSTYLRYYHVFKENELQSLCSQITECSVLKSYHDNGNWCVILEKV
NT seq 1782 nt   +upstreamnt  +downstreamnt
atgagtgaagcattaaagaaaagacaagaaaaaaagaaaagaaaaatatgtgcaaaactg
caggcatatggtttacaaatcgactgtaacccaacttcaaccgttgttattgccaatgca
ggaattggtaatatggtttgttcaactgaacttacacatttggtttcgcaatatggagac
tgcatattgctaaaacttgacggcaaatcttatgcagttgtacaatacaagaacacagaa
tcagctaaatatgctgcagaatcactagaaggtcatcaaatggtgaaacagactaagaat
gagtttgcaacgttttattgtttttacttgaataatattccacaagaagatgtgatattc
gcagaagagaaaagtgaccttccaaatggtttgattaaaattgaaaactttcttaacaaa
gaagaagaacaggccctcatcaactgcatacaacacgacattagcattttatccaatgat
catgtttctgaaaagttaaaacaccgtactgtgttgcactatgggtataaattccgttat
ggtacaaacgatgttgatattaacaatcctattagtgaaggtcttccaaactacattgaa
aatctattggatcgaattatggctacaggatatctaccatcaaggccagaccaactcacc
attaacatgtatgagcctggagatggtatacccccacatactgataacacaagatccttt
gatggtgtgttatccactgtaagcttgggttcacatactgttatgaactttagtaaagaa
ggtgctgaaagaatagatgtgtgtgtcgagccgcgtactttatttttatttactggtgaa
tcaagatatgagtggagacatggcatccagcaaagaaagtttgatattttagatcagggg
aaaaaaataaccactcggaccattaggtattctttgacatttcgaacagttgtaaaagat
gccggaaaaagtgggtgtacacaaaaagaggagtttttgattccagaaaatgagtccgat
gcaaattcccttgaaagttctcatgttcattctgtctatgataaaattgccgatcacttc
tcatcaactagagaaaaaccatggcctcatgttgtggaattcttgcaaagtctgcctcgt
gcatcagttgtattggatgttggttgtggaagtggaagatatcttggtgtttgtcaacaa
cactttatgcttggctgcgatcgcagcgtgtctcttattaatatctgtaaacagaaaaat
tttccatcttttgtatgcaacggtttaaagcttccagtgcgagaaggaagttttgatgct
tgtatatgcattgctgttattcaccattatgccacagagaagcgtagaattcaagctatt
aaagaacttctaagagcagtaagaataggtgggaaaattctcatttatgcatgggccatt
gaacaaacatgtaacaacgtaaaatcaaaatatcttaaaaagaatgcggtcacatcaaac
caggaacacattgagtctgatgtttcaagcccaaaagatggaaagcaaaagttagcggtt
catgttaacaggacattatttgttcagcaagatcttttagttccgtggaaatcaaaaaat
gttaacagtaaaagtaacaactcatgctcaacttatttaagatattatcatgtgtttaaa
gaaaatgaactgcaatcactttgctctcaaataactgaatgctctgtgttaaagtcttat
catgacaatggtaactggtgtgttattctcgaaaaagtataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (63)   

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