KEGG   Ciona intestinalis (yellow sea squirt): 100185029
Entry
100185029         CDS       T01056                                 
Name
(RefSeq) vesicle transport protein SEC20-like
  KO
K08497  protein transport protein SEC20
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    100185029
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100185029
Membrane trafficking [BR:cin04131]
 SNARE
  SNAP-25[N] (Qb)
   Sec20
    100185029
SSDB
Motif
Pfam: Sec20 RACo_linker DLP_helical E2R135
Other DBs
NCBI-GeneID: 100185029
NCBI-ProteinID: XP_002129504
Position
1:2407999..2410307
AA seq 243 aa
MSWVARVNRTNDVTSNSPEQCKDDIVKLNCALKAIIQDIWECKGPVLALNDLNKDARRLV
NELRSKISELDELANVADQERVRLDLKEDVENQTKQLENTQATLRKANLTCKLAIDNREK
DALLGSRETRTQQIRHRNTVASRQNIAQSASDITENLLTISRTLDNTVHQSSHALNSLVS
SSKTVKDTDTELKNQAGLIQTGHRLLTKYNRREYTDKILIFLALALFFSTVLYILKRRLF
PSL
NT seq 732 nt   +upstreamnt  +downstreamnt
atgagttgggttgcgcgagttaatcgaaccaacgacgtaaccagtaactcaccggagcaa
tgtaaagatgatattgtgaaattaaactgtgcactaaaggctataatacaggacatatgg
gagtgcaagggacccgtgcttgctctcaatgatttgaacaaggatgcacgaagattggtg
aatgaacttcgatctaagatttctgagcttgatgaacttgcaaatgttgccgatcaagaa
cgagttcgactcgatttaaaagaggatgttgaaaaccaaacaaagcaactcgaaaacaca
caagctacactgcgtaaagcaaatctaacatgcaaacttgctatcgataacagagaaaaa
gatgctttgcttggatcaagagaaacaaggactcagcagattcgacatcgaaatacagtc
gcgagtcggcaaaatatagcacaaagtgcgagtgacatcactgaaaacttacttactatc
agtagaacattagacaacacagttcatcaaagctcccatgctcttaacagtttagttagc
tcatcaaagactgttaaagacacggacaccgaattgaagaatcaagctggattgatacaa
actggtcaccgtttgctcaccaagtacaacaggagagaatacacggataagattctcata
tttcttgcacttgcattatttttctcaactgttttgtatattttaaaacgaaggttattt
ccttctttatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (45)   

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