KEGG   Ciona intestinalis (yellow sea squirt): 100186307
Entry
100186307         CDS       T01056                                 
Name
(RefSeq) tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
  KO
K05545  tRNA-dihydrouridine synthase 4 [EC:1.3.1.90]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cin03016]
    100186307
Enzymes [BR:cin01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.90  tRNA-dihydrouridine20a/20b synthase [NAD(P)+]
     100186307
Transfer RNA biogenesis [BR:cin03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    100186307
SSDB
Motif
Pfam: Dus NMO His_biosynth TMP-TENI DHO_dh ThiG DUF561
Other DBs
NCBI-GeneID: 100186307
NCBI-ProteinID: XP_002120440
Ensembl: ENSCING00000001869
Position
12:1322142..1323137
AA seq 305 aa
MTNAVMELLTDPKPTKICAPMVRYSKHAFRLLVRKYDCDIAYTPMIVAKSFLESDSCRQN
EFITSKDDTPLIVQFAAKNAKEFSEASELIYPFASGVGLNCGCPQRWAMAEGYGAKLLQK
PEEIVDFIRFTKALVSDEKFTISVKIRLHEELARTVEMCRGLEKAGASFVSVHGRTSKER
HQPVHYDAIKILKESVSIPIVANGGVNTYKDFDKVHKMTGANGVMVAQGLLNNPALFQGY
KTTPLSCVKDWLDISLSYGTPFTPFHNHLIYMLDNVTSRAEKRIFNNLQSTPAVLEFLNK
YFVDS
NT seq 918 nt   +upstreamnt  +downstreamnt
atgacaaacgctgtgatggaactgctcactgatccaaagcctacaaaaatttgtgctcca
atggtccgatactcgaaacatgcatttcgtttacttgtgcgaaagtatgactgcgatatc
gcttataccccaatgattgttgcgaaatcttttttagagtccgattcttgccggcaaaat
gagtttatcacttcaaaagatgacacgccacttatagtgcagtttgcagcgaaaaatgca
aaggaattttctgaagctagcgagcttatttacccttttgcaagtggggtaggacttaac
tgtggctgtccacagagatgggcaatggcagaaggctatggagcaaagttacttcaaaaa
ccagaagaaattgtggattttataagatttacaaaagctcttgtgtctgatgaaaagttt
actatttcggttaagatacgtttgcatgaagaattggcgcgaactgtagaaatgtgtaga
ggattggaaaaagctggggcatcttttgtttctgtgcatggcagaacttcaaaagaacgt
caccagcctgttcattatgatgcgataaagattctaaaagaatctgtttcaataccaatc
gttgcaaatggtggcgtaaatacttacaaagattttgataaagttcataaaatgaccggc
gctaatggagtaatggtagcacaaggtttattaaataatccagcgctctttcaaggttat
aaaacaacccctttgtcttgtgtgaaagactggctcgatataagtttaagctacggaaca
ccttttacaccgtttcataaccatcttatatacatgcttgataatgttaccagtcgtgca
gaaaaacgaatttttaacaacttgcaaagtaccccggcagttttggagtttttaaataaa
tattttgttgattcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (41)   

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