KEGG   Ciona intestinalis (sea squirt): 100186631
Entry
100186631         CDS       T01056                                 

Name
(RefSeq) multiple PDZ domain protein isoform X1
  KO
K06095  multiple PDZ domain protein
Organism
cin  Ciona intestinalis (sea squirt)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 Peptidase_M50 L27_2 Tricorn_PDZ
Other DBs
NCBI-GeneID: 100186631
NCBI-ProteinID: XP_018667521
Position
5:complement(3700137..3728893)
AA seq 2061 aa
MPSQEELEKAALIIKRIQNQLKRQGDYSNDAELEAMKSLMESPLFKKMAQLQASIQQLKK
EVKKDDFDINNVEFSHENGGLVVDGKEVENDSSMFNGRNGDLEEFIKSAAQGRETEMIEI
FKSENEGLGFSVVGLKSEHRGDLGIFVQDIRSGGVADRDGRLKESDQILVINNQPLTQTI
SHQQAIGILQKVKGTVKLVVARGGIPQSQGHLSAEGSQVSRSSSILSSLSQASGMPPDTK
WTDVETIDLRNDGRGLGFGIVGGRSTGGVVVKTIVPGGAAHEDGRLKSGDHILRIGEEDL
MNMGSEEVAQVLRQCGAHVRLIVARGPVDDDDDVNDDLQDDKQDAGERGSVSSEDDSHSS
YSSSSQEENSLPADAQIFDVELVKDAKGLGITIAGFLPEDQNRNGTPGIYVKGVSSGSAA
DIDGRIRPGDKLIAVDGKRLDGDDVSSDQAVEVLRSTGVVVRLTLARTTNRNETQNKSQP
VSRQIVNERLQQEKEFGQELSPDEEERIKQKWRVVMGPQCDIVIAQLKKYNYLSGLGISL
EGTVDENEMPHHYIRSILPEGPVGQSNKLEAGDELLEVNGNHLLGLSHVEVVVILKELPL
TVRMVCARPKEHWTRDPARDSVVFEEKDGDFLEMKMPPINDPMNIIPPAHENVDDDTSSD
SSLSQDSISQIQMHLPEMPPMQNQVYESELPTPVNQFHPQSSVSDSDETDVETSPKNEQE
QLNSAWEDEVTVIELEKGDRGLGFSILDFQDPLHEDKTAVLVRSLVDGGIAEQDGRLEPG
DRLIFVNDKSLQFADLDQAVRVLKAVPQGRVLIGVTKPRPMFRVPPSSDSEDAVEEEEVR
TPVLPRPPSVRSSSSSSSSTSQEMQHYPMPSDSQYSASPVEMEVKLPGPPPPPPHIEPNP
PTPEYEPPTPRYEPPTPRYEPPAHHFEPPQPQIVSEPLQQSYEPPIQRYEPPQPQTPPES
PPAAPHVIRTQSGKYTVKDYNRPARLSSSETNPVTTANQKVEVKQVQMSGMTAIAVTANT
IQRKEEPQQPIIRQQEVFSSAPVVPPKPVGYTAPSWQTAEPEKPKPKPPIDGFERIVQMS
KGKSSLGITVSPDKEGDGLIVRSVITGGAVARAGEPNIGDMIRRVNNDSATGLGAAQARS
LIRNHSAYSADVKIAYIPKKYIEAFKLGLPVPEDSDVDEDRRTPKTPSRVDHFAALKSVF
EMQNGQQPQDASKFYLDSSLWGSTKRVDIRREAGQSLGISIVGGKNINANSQQQISLDNG
DLIDGIFIKEIIEGSPVDVNGEMKPGDKILKVDGVDLSNATHEGAVEAILKAGVHVVFHV
QTFVGHPKQIILNSKSCTHFTGGKLMEPPPPQPEEESEIVKAERKYGHLPGEIHVVEMVK
GPAGVGLSLAGNKDRSQQQIFVVGVNPNGAAGKDGRVKVGDQLLEINHVPLNQRNNHELA
SNVIKNAKSKLLFVINRQQKEARADKPLKKTPSVESSSHRRQSSDVPAEKSPPPPKRSSS
GGRHSPFSDVRVIKLVKDFQGLGFAISETPTGIVVQSIAPGGTADRDGRLVRGDHILAVD
DQSVSGVSYETAISILKQSRGTVKLTVASGPVKSSASSDASSVTSSGHRLSTMSPTLDSG
SENSDPLTCPIIPGRETTIEINKGKAGLGVSIVGGSDSLLDAVLVHTVYEQGAAAKDGRL
WPGDRILTVNNHSLRHATHDEAIEVLRNTPGKVHLTILRDENRETINNESESDIYDIYDV
NLMKKSGRGLGLSIVGRKNAAGVFVSDLVQGGAAARDGTMKPGDQILSVNGVNIRMAGQE
VAAQLLKNAQGKVDLRIGRLKSGAPSDLIKMPKLSLSSNASEDAPKSPTDDLGGDIRFVE
IDKTPTQPLGISIAGGVGSPLGDVPIFVAVVQNHGAAAGKLKVGDRIRSINGQTTDNKSH
DEVVAMLKGQDDAIVLMQVQEGGESIKQLSEYLVQSAKPNLPISGQQGSQEKKEIDIELN
RGSDGLGFSIVGGHGSPHGDLPIYVKSVFSVGAAAVDGRLRRGDRIVSVNGEKLDGYTHE
EAAEALKRRATRIILRVVPST
NT seq 6186 nt   +upstreamnt  +downstreamnt
atgccgtcgcaagaagagcttgaaaaagcagctttgattattaaacggattcaaaaccag
ttaaaaaggcaaggtgattattccaatgatgctgaactagaagctatgaagtcactaatg
gagagtccgctgtttaagaagatggcacaacttcaagcttcaatacaacaacttaaaaaa
gaggtaaaaaaagatgacttcgacatcaacaatgttgagttttcacacgaaaatggtggg
ttggtggttgatggtaaagaggtggaaaacgatagttcaatgtttaatggtagaaatgga
gatttggaagaatttattaaatctgctgcgcaaggaagggagacggaaatgattgaaata
tttaaatcggagaacgaaggacttgggtttagtgtggttgggttgaagtcagaacacagg
ggtgaccttggaatatttgtacaggacatcaggtctggtggagtggctgacagggatggt
aggttgaaggaaagtgatcaaatacttgtcataaacaaccaaccactcacgcaaaccata
tcgcatcagcaagcaattggaatcttgcagaaagtgaaagggaccgtcaaacttgtggta
gcacgaggggggattccccaatcacaaggccacttatcagcggaggggtcacaggtgtca
aggtcatcatctattctaagctctctatcccaagcctcaggcatgcctccggacacaaaa
tggaccgatgtggagacgattgatcttcgcaatgatggaagaggacttggattcgggatc
gttggaggaagatcaactggaggagtggtggtgaagactattgttcctggaggagcagct
catgaggatgggaggttgaagtccggggatcacattctcaggatcggggaggaggacctg
atgaacatggggtccgaggaggtggcacaggttctaaggcagtgtggagctcatgttaga
ctgattgtggctcgaggccctgttgatgatgatgatgatgtaaatgatgatcttcaggat
gataaacaagatgcaggagaaagaggatctgtatcttctgaggatgactcacattcttcc
tattcaagtagcagccaagaagaaaattccctcccagctgatgctcaaatatttgatgta
gaactagtgaaggatgccaagggtcttggaattactattgctggcttccttccagaagac
caaaatcgcaatggtacacctggtatatatgtaaagggggtatcatctggttctgcagct
gatattgatggtaggattcgtcctggggacaaactgatcgctgttgatggtaaaagattg
gatggagatgatgtatcaagcgatcaagctgtggaagttttacgatcaactggtgtggtt
gtacgactcactcttgcaaggactactaacagaaacgaaactcaaaataagtcacaacct
gtatcccgacaaattgtgaatgaaagacttcagcaagaaaaagagtttggtcaagagttg
agtcctgatgaagaagaaaggatcaaacagaagtggagggtggtgatgggacctcagtgt
gatattgtgattgctcaactaaagaaatacaattacctgagtggactcggtataagtttg
gagggcacagtggatgagaatgaaatgccacatcattatataaggtccattcttcctgaa
gggccagttgggcagagcaacaagcttgaagctggtgacgaacttcttgaagtaaacggc
aaccatttacttggtttaagccacgtagaagtggttgtcatcctcaaggagcttcctctt
acagtccgtatggtgtgtgcgagacctaaggagcattggacacgagatcctgcgagggat
tcagtcgttttcgaggagaaagatggagattttttggagatgaaaatgccgccaataaac
gacccgatgaatataattcctcctgctcatgaaaatgtagatgatgatacatcatctgac
tcatcattatcacaggattctatctcacaaatccagatgcacttgcctgagatgccacca
atgcagaaccaagtatatgaatcagagttaccgaccccagtcaaccagttccatccacaa
agtagtgttagtgacagcgatgaaacagatgtggaaacttccccaaaaaatgagcaagaa
cagttaaacagtgcttgggaagatgaagtcactgttattgaacttgagaagggtgatcgg
ggtctggggtttagtatcctggattttcaggacccgttacatgaagacaaaacagcagtc
cttgttcggtctttagtggatgggggtattgcggaacaagatggccgacttgaacctggt
gatcgacttatattcgttaacgataaatcgcttcagtttgccgaccttgaccaggctgtc
cgtgttttaaaggctgtaccacaaggtcgtgtattgattggagtaactaaaccacgtcca
atgttcagagttccaccaagttctgacagtgaagatgcagtagaagaagaggaagtaaga
acacccgttcttccacgacctccatcagtcagatcgtcttcctcttcatcatcttccaca
tcgcaggaaatgcagcattaccccatgccctctgactcccagtattctgcctcacccgtt
gaaatggaagtcaaactaccgggacctccaccccctccaccccatattgaacccaaccct
ccaaccccagaatacgaacccccaacaccccgctacgagcccccaacgcctcgttacgag
cccccagcacaccattttgagcctccgcagccccaaattgtttccgaacccctacaacaa
tcttacgaacccccaatccagcgttacgagcccccgcagccccaaacaccccctgaaagc
ccacctgctgccccccatgttatccgcactcagtcaggcaaatacacagttaaagattac
aacagacctgcgcgtttgtcttcatcagaaaccaaccctgtcaccactgccaatcaaaag
gttgaagtgaagcaagtccagatgtcaggcatgacagctatagcagtgacagcaaacaca
atacaacgcaaggaagaacctcaacaacctattatcaggcagcaagaggtgttctcatct
gctccagtggtccccccaaaaccagtgggttatactgccccctcatggcagacagctgaa
cctgagaaaccgaaaccaaaacctccgatcgacgggtttgaacgaattgttcaaatgtca
aaaggaaaatcaagtttaggtattactgtctcacctgacaaggaaggcgacggtttaatt
gttcgttccgttatcactggaggcgctgttgcacgggcaggggagccaaacataggggac
atgattcggcgtgttaataacgactcagctacgggattaggggccgctcaagcacgctcg
ctaatccggaaccattcagcttacagcgcagatgtcaagatcgcctacatccctaaaaaa
tacattgaggcattcaaacttggacttcctgttccggaggactcagatgttgatgaagat
cgtcggacaccgaaaactccatcaagagttgatcattttgcagcacttaaatctgtattt
gaaatgcaaaatggacagcaacctcaggacgcttcaaagttttatcttgattccagtttg
tggggttctacaaagagagttgacatacgtagagaagcaggtcaatcacttggcatcagt
attgttggcgggaaaaatatcaatgcaaactcacagcaacaaatatcactggataatggg
gaccttattgatggaatcttcatcaaagaaataatagaaggaagtccagtagatgtgaat
ggtgaaatgaaaccgggcgacaaaattttaaaagttgatggggttgatttgagtaacgca
acacacgagggagcagtggaggcaatattaaaagcgggcgtgcacgttgtctttcatgtt
caaacgtttgtcgggcatccaaaacagataatccttaacagcaaaagctgtactcacttt
actggtggaaaactcatggaacctcccccaccccagccagaagaagagtcagaaattgtg
aaagcagagcggaaatatggacatttacccggagaaattcacgtcgtggaaatggtgaaa
ggccctgctggtgttggattaagcttagctgggaataaagacaggtcccaacaacagata
tttgtggttggggttaaccccaatggagcagcgggtaaagatgggcgtgtcaaagtgggc
gaccaactactggagatcaaccacgttcctttgaaccaacgtaacaaccacgaacttgcg
tcgaatgtgatcaagaatgcaaaatcgaaacttctatttgtgatcaatagacagcagaag
gaagcacgagctgataaacctctaaagaaaactccttcagtagaatcctcatcccatagg
aggcagagctctgatgtccccgctgagaaatctcctcctcctcccaaacgctccagctct
ggaggacgacatagcccattttctgacgtcagagttatcaagctcgtaaaggatttccaa
ggattaggctttgcgatctctgaaacccctactggtatagtggttcaatccattgcacca
ggtggtacagcagatagagatggtagattggtaagaggagatcatatacttgctgtggat
gatcagtctgttagtggagtctcttatgaaacggcgatctccatattaaagcagtcaagg
ggaacagttaaacttactgtggcatctggtccagtcaagtcttctgcttcatcagatgcc
tcttctgttacatcctccggacacagattatccacgatgtccccgaccctggatagcggg
agtgagaactctgacccacttacgtgcccgattattccaggcagggaaacaaccatagaa
atcaacaaagggaaggctggacttggagtgagcattgtgggaggatctgacagtttgttg
gatgcagtgttggtgcacacagtgtatgaacaaggagctgctgcaaaagacggaaggtta
tggccaggtgacaggatcttaacagtgaacaatcacagtttgcgtcatgccacacatgac
gaggcaatcgaagtattgcgcaacaccccggggaaggtccaccttactatcctacgtgat
gaaaacagggagacaattaacaatgaatcagagtccgatatatatgatatctatgatgta
aatttaatgaagaaaagtgggcgaggtctcggacttagcattgttggaagaaaaaacgca
gctggtgtgtttgtgagtgaccttgtacagggtggtgcagcagcaagagatggaacaatg
aaacctggagatcaaatactaagtgttaatggcgtcaatataaggatggctggacaagaa
gtagctgcacaattgctgaagaatgctcagggcaaagtcgatctcaggatcggaagatta
aagtccggagctccttctgatctcataaagatgccaaagctaagtctcagttccaatgca
tctgaagatgctcctaagagtcccactgatgatttgggaggagacatccgattcgtggag
atcgataagacccccacccaaccacttggcatcagtatagcaggtggagttggttctcct
ttaggggatgttcccatttttgtagcagttgttcaaaaccatggggcagcggcaggaaag
ttgaaggttggggacagaatacgaagcattaatggacagactacagataacaagtcacat
gatgaagtggtagcaatgctgaagggtcaggatgacgctattgttctaatgcaggtgcaa
gaaggtggggaaagtataaaacaactaagtgaatatcttgtacaatctgccaaacctaat
ttaccaatcagtggacaacaaggaagccaagaaaagaaggaaatagacatcgagttgaac
cgggggtctgatggacttggttttagtatcgttggagggcatggatcaccacatggggat
cttcctatttatgtgaagtctgtgttctcagttggagcagcagcagtggatgggaggtta
cgtaggggggatcggattgtatccgtgaacggcgagaaattggacggttatacgcatgag
gaagcggccgaggctctcaaacgaagagcaacccgtatcatacttcgtgtagttccgtcc
acataa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (192)   
   KEGG ORTHOLOGY (1)   
   RefGene (188)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (209)   

Download RDF
DBGET integrated database retrieval system