KEGG   Ciona intestinalis (yellow sea squirt): 100186747
Entry
100186747         CDS       T01056                                 
Name
(RefSeq) autophagy-related protein 13-like
  KO
K08331  autophagy-related protein 13
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04136  Autophagy - other
cin04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cin00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100186747
   04136 Autophagy - other
    100186747
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100186747
   03029 Mitochondrial biogenesis [BR:cin03029]
    100186747
Membrane trafficking [BR:cin04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    100186747
   Atg1 complex
    100186747
Mitochondrial biogenesis [BR:cin03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    100186747
SSDB
Motif
Pfam: ATG13 EAD9
Other DBs
NCBI-GeneID: 100186747
NCBI-ProteinID: XP_002123340
Position
1:complement(2173416..2179467)
AA seq 613 aa
MSSSNLSTQDKRDLDKFIKFLSLKSTQIIVQSRLGRKVSTKSVASPTGAEWFNLAVKDYP
EIQKEAKAALNNGNPSVEQSLVVEISLRTSDADLLVLEVWSLSVTNRLEDVRVHHTIYNR
MSLLLKSLLCVTRLTPAYKLSRNQGSEYVICYRVYMGQISQTGLGEGFQTLRVGSLGTPL
GTITMSAAYRTNQNLHVSTKGLTPKIESVMPVKNDYFGNTARPHISSPARPCYTLKSRIR
TMSETSETAIPSVESPPSCHLFNTSFSTSPVDYKHKGEHILDRSEQQATFTVGTPPRLTR
ASTSSPILVHRNKLYHPQNSPQSPPENRHQSFIKSKSRDPTIQKYGSSAPLMQVFYKHHT
PPQPSVTAALEPQPPFQCSPDRQEKTAVHCYSTSQPTKYCHWTNSNVRTITAHNIPPSKG
GEFSTDLQTTTHISPPHPQLVTGAFVSGKTAARAKAAIAEAEAKHLAFRDLLRTTPTDCP
SEDNASQLSSSPESLAKEIIGKESKSLNSVPRRYSSSSSLSSKQSTDGSVAAKQNSDDYV
MVDLNPAFARNDSSIDLGTFYRECENVPELIMFNEQHGTETNETLLDLTKQLEDYEQEMT
DFDAFLQEINAAV
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgtcgtcctcaaacctctctacacaagacaagagagatcttgacaaattcattaaattt
ttgagcttgaaaagcactcagattatcgtacaaagccgcttgggaagaaaagttagcaca
aaatctgttgcctcgccaactggggctgaatggttcaaccttgctgtgaaagattaccca
gagatacagaaagaggcaaaagctgctttgaataatggcaacccatctgtggagcaaagt
ttggtggttgaaatatcactaagaacaagcgatgctgatttgctagtgctggaagtgtgg
tctcttagtgttacaaacagattagaagatgttcgtgttcaccacacaatctacaaccga
atgtcattacttttgaaatccctcctatgtgttacgaggcttacaccagcttataagtta
tcacggaaccaaggaagtgaatacgttatctgctacagagtctacatgggccagataagc
cagactgggcttggtgaaggattccaaacccttagagttggttcacttggtacacccctt
ggtaccataactatgtcagctgcatatagaaccaaccaaaatttacatgtctctactaaa
ggactaaccccaaagatagagtcagtgatgccagtcaaaaacgattacttcggcaacact
gcacgaccccacatctcctctcctgcacggccgtgttacacactcaagtcaaggataaga
acaatgagtgaaacatccgaaacagcaataccaagtgtggagtctccaccatcgtgtcat
ttgttcaatacatcattttcaacttcgcctgtggattataaacataaaggcgaacatata
ttagacaggagtgaacagcaagccacgtttacagttggcacaccacctcgcctgacacgt
gcctccacatctagtcctatccttgtgcataggaacaaattataccatccacagaacagc
ccacagtcaccaccggaaaaccgccaccaatcgtttataaaatctaaatcaagagaccct
accatacaaaaatatggttcctcagccccactgatgcaggttttttacaaacatcataca
ccaccccaacccagtgtcactgcagcgttagaaccccaaccccccttccaatgctcacca
gataggcaggaaaagactgccgtacattgctactccacctctcaacctaccaaatactgc
cattggactaactccaatgtacggacaataacagcgcacaatatacccccctcgaaaggt
ggggagttcagtacagatcttcaaacaaccacccatatttccccaccacacccacaacta
gtaacgggggcgtttgtatccggcaaaacagcagcaagagccaaagcagcaattgcagaa
gcagaggcaaagcaccttgctttccgagatttactccgcactacacctaccgattgccca
tctgaagacaatgcttcacaattgagtagttcacctgaaagtttggcaaaagaaatcatt
ggaaaagagagcaagagtttgaattctgttccacgaagatatagcagtagtagcagcctt
tcttctaagcagagcactgatggttctgttgctgccaaacaaaattcagacgactatgtt
atggtggacttgaatccagcgtttgcacgaaatgattcctcaattgaccttggtacattt
tatcgcgaatgtgaaaacgttcctgagcttataatgtttaatgaacagcatggtactgaa
actaatgaaacactgttggatttaacaaaacagcttgaagactatgagcaggagatgaca
gactttgatgcgtttctgcaagaaataaatgctgctgtttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system