KEGG   Ciona intestinalis (yellow sea squirt): 100187162
Entry
100187162         CDS       T01056                                 
Name
(RefSeq) 26S proteasome regulatory subunit 10B
  KO
K03064  26S proteasome regulatory subunit T4
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03050  Proteasome
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    100187162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:cin03051]
    100187162
Proteasome [BR:cin03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     100187162
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_16 PRS7_OB AAA_22 AAA_2 AAA_5 RuvB_N nSTAND3 AAA_7 DUF815 AAA_14 Prot_ATP_ID_OB_N AAA_18 TIP49 AAA_33 AAA_24 RNA_helicase Mg_chelatase AAA_11 AAA_3 bpMoxR DUF5906 AAA_28 ATPase TsaE NACHT AAA_25
Other DBs
NCBI-GeneID: 100187162
NCBI-ProteinID: XP_002129627
Ensembl: ENSCING00000009539
Position
3:2293762..2299409
AA seq 388 aa
MDAREKVLTDYRKKLLEHKEIDGRLKGLREDLKKKTKDYDKSENDLKALQSVGQIVGEIL
KQLTEEKFIVKATNGPRYVVGCRRQVDKSKLKSGTRVALDMTTLTIMRYLPREVDPLVYN
MSHEDPGDVKYSSIGGLSEQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKT
LLARAVSSQLDANFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR
RFSEGTSADREIQRTLMELLNQMDGFDTLGQVKMIMATNRPDTLDPALLRPGRLDRKIRI
DLPNEQGRMDILKIHAAPITKHGEIDYEAVVKLSDQFNGADLRNVCTEAGLFAIRAEREY
VIQEDFMKAVRKVSDNKKLESKFDYKPI
NT seq 1167 nt   +upstreamnt  +downstreamnt
atggatgctcgtgaaaaagtattaacagattatcgtaaaaaactgcttgaacacaaagaa
atagacggacgattaaaaggcctaagagaagacttaaagaagaaaacgaaggattatgac
aagtcggaaaatgatttaaaggcactgcaaagtgttggtcaaattgttggagaaatttta
aaacaactgactgaagaaaaatttattgtaaaagcaacaaatggtccacgttatgttgtt
gggtgccgaagacaggtcgataaatcaaaacttaaatctggaaccagggttgctcttgat
atgaccacccttactataatgagatatttaccaagagaggttgatcctcttgtgtacaac
atgtcccatgaagatccaggtgatgttaaatattcaagcattggaggtttatctgaacaa
ataagagaactaagagaggtcattgaacttccactgctgaatccagaattatttcttcgt
gttggcatcactccccctaaaggttgtttactgtatggtccacctggcactggcaagaca
ctgttggctcgtgcagtgtcaagtcagttagatgcaaatttcttgaaggttgtgtcctca
tctattgttgacaaatacatcggagaatctgctcgtttaatccgtgagatgttcaactat
gcacgtgatcaccaaccgtgcatcatattcatggatgagattgatgcaattggaggaagg
aggttctcggagggcacgagcgctgatcgtgaaatccaacgtactctcatggagttgctc
aaccagatggatgggtttgatactcttggtcaggttaagatgatcatggctaccaaccga
ccggacacattagatccagccttactaagacctggtcgtcttgacagaaagattagaatt
gatcttcctaatgaacagggtcgcatggacatactgaaaattcacgctgctccgatcacc
aagcatggtgagattgactatgaggcggtcgtcaaactatccgatcaatttaacggcgcc
gatctacgtaacgtgtgcacggaagcagggctctttgctattcgggcagagcgagaatat
gtgatacaagaagacttcatgaaggctgtacgcaaagttagcgacaacaagaaattggag
tcgaaattcgactataaaccgatatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (95)   
   KEGG ORTHOLOGY (1)   
   RefGene (90)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (29)   
   Pfam (29)   
All databases (132)   

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