KEGG   Ciona intestinalis (yellow sea squirt): 445741
Entry
445741            CDS       T01056                                 
Symbol
pellino
Name
(RefSeq) pellino protein
  KO
K11964  pellino [EC:2.3.2.27]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cin04121]
    445741 (pellino)
Enzymes [BR:cin01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     445741 (pellino)
Ubiquitin system [BR:cin04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Pellino proteins
    445741 (pellino)
SSDB
Motif
Pfam: Pellino_FHA Pellino_RING
Other DBs
NCBI-GeneID: 445741
NCBI-ProteinID: NP_001027714
Ensembl: ENSCING00000006508
UniProt: Q9NDP9
Position
3:5939335..5949903
AA seq 455 aa
MKQEGMDVSASPALAVAGGMPMDIQFEAGASYHNFSQEDAPKEDEGDIIYGQLIVLGTNG
QLPTGDKGRRRSCFTLRRKRKATGVKPSDQHQVYQKASHSETFLSKDHHSVSYTLPRSVV
VVPYVHDDNSDMFQIGRSTEEPIDFVLMDIEAGSSIPTNHKPQTQPKQSTISRFACRIVC
DREHPYTSRIYAAGFDTSMNIILGEKAPKWTTEQNGKKIIDGLTTNGVLIMQPKNGFSES
STPTQWKETSVCGNIYQLRESRSAQLPGIRMPEDNNVLVNGTLIDLCGATLLWRSSSHER
CMPTPLHIDELIHKLNLGRPQCPVGLTTLAFPRRSKATKETEKQPWVYLQCGHVHGRIEW
GYQGEEERICPLCRSVGKYVPLWVGGEPAFYVDIGPPSYCFVPCGHVCSQKTAIYWSQTA
LPHGTQAYSAACPFCATPLEGDLGYKKLIFQQPLD
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgaagcaggaaggtatggatgtttctgcatccccggctcttgcagtagctggtggtatg
cccatggatatacagtttgaagctggagcttcttatcacaatttttcacaagaagatgcc
ccaaaagaagatgaaggcgacataatatatggacagttaatcgtccttgggacaaacggt
caactccctaccggcgataaaggaagacggagaagttgttttactctacgacggaagagg
aaagcaacgggcgtgaaaccatcagaccaacatcaagtatatcagaaagcatcacattca
gagacctttctaagtaaggatcatcacagcgtttcatatactttaccgagaagtgttgta
gtagttccttatgttcatgatgataacagtgatatgttccagattggccggtcaacagaa
gaaccaatcgattttgtgttaatggacatagaagctggttcatcaatccctaccaaccat
aaaccacagacacaaccaaaacaaagcacaatatcaaggtttgcgtgtcgaattgtttgt
gatcgtgagcatccgtatacttcgagaatctatgcagcaggtttcgatacgtcaatgaat
attatattaggggaaaaagctccaaagtggacaacagaacaaaatgggaaaaaaataatt
gacgggttaacaacaaacggtgtcttaatcatgcaaccgaagaatggattcagtgaatca
tccacgcccactcaatggaaagaaacttctgtgtgtggaaatatttatcaacttcgtgaa
tcccgttctgcacaactgccagggataaggatgcctgaagataataatgttcttgtgaat
ggaacgcttatagatctatgtggagcaactttactgtggagatcttcaagccatgaaagg
tgtatgcccaccccactacacatcgatgaactcatccataaacttaacctgggtcgccct
caatgccccgtcgggcttaccacgcttgcttttcctcggcggagcaaagcaactaaagaa
accgagaaacagccgtgggtttatttacaatgcggacacgtgcatgggaggatagaatgg
ggttatcaaggggaggaagaaagaatctgccccctatgtcgatccgttggtaagtacgtg
ccattgtgggttggtggtgaacctgctttttatgttgacattggacctccttcttattgt
tttgttccatgcggccatgtttgttcacaaaaaactgctatatattggtcacaaactgcg
ttaccacacggcacacaagcttacagtgctgcttgtcctttttgcgcaacacctttagaa
ggcgatttgggatataaaaaattgatttttcagcaaccacttgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (57)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (71)   

Download RDF
DBGET integrated database retrieval system