KEGG   Ciona intestinalis (yellow sea squirt): 778705
Entry
778705            CDS       T01056                                 
Name
(RefSeq) nuclear transcription factor Y subunit alpha
  KO
K08064  nuclear transcription factor Y, alpha
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cin03000]
    778705
Transcription factors [BR:cin03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Heteromeric CCAAT factors
    778705
SSDB
Motif
Pfam: CBFB_NFYA
Other DBs
NCBI-GeneID: 778705
NCBI-ProteinID: XP_009858368
Position
4:4413070..4417321
AA seq 372 aa
MEANMVNTGGTTGSVQAQLVQTTGPNGQPTFQLIAVNGAQGNQQPPQQQQQQQITLQQVQ
TNNIAGNQSQQNFGNTFQLVQTGNGLQLQQSNNTPSQLVIQQPQQQQQQQQQQQQQVQSV
QGNVTQLLLQTDSNNSNSAQLIQIGNNSNLTQSGQQQIVLQPVNNTVNAVSSVLPSNTLN
IANSSSIQNGGGIIMMIPNGSGGFQRMQLAQGASGSSDTLEEEPLYVNAKQYHRILKRRQ
ARAKLEAEGRLPKERKKYLHESRHKHAMMRNRGNGGRFNSGLGKEEEMGSFSQVGHPTTQ
SNINVINPSVYQESSQEQALLKGIMDERTNQSSSPLDVMMQNSGLTLNQLPTTTDTNVVT
LGELYHSTTAND
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggaggccaacatggtcaatactggtggaacaactggttcggttcaagcccagcttgtt
caaactacaggacctaatggacaaccaacatttcagttgattgctgtaaatggagcacaa
ggaaaccaacaaccgccacaacaacaacaacagcaacaaattactttacaacaagttcaa
acgaacaatattgcaggaaatcagtcgcaacaaaactttggtaacacgtttcaactagtt
caaactggtaatggacttcaactgcaacaatctaacaacacaccttctcaattggtaatt
caacaaccacagcaacaacaacaacaacaacagcagcagcaacaacaagttcaatctgta
caaggcaatgtcacccaactattattgcaaactgacagcaataattccaactctgcccag
cttattcagattggaaataactcgaatctcacacaaagcgggcaacaacagattgtatta
caacctgtaaacaacacagttaatgctgtttcatctgtgttaccttccaataccttaaac
attgctaactcaagctcaatacaaaatggtggaggaataattatgatgatcccaaatgga
agtggtgggtttcaaagaatgcagttagcgcaaggtgcctctggtagtagtgacacatta
gaggaagaaccattgtatgtaaacgcaaagcaataccatcgtatactgaagaggagacag
gcaagagctaaactagaagcagaaggaagacttccaaaagaaagaaaaaaataccttcac
gagtcccgacacaagcatgccatgatgaggaatcgaggaaatggtggaaggtttaactcc
gggcttgggaaggaagaagaaatgggttccttttcacaagttggtcaccccaccacacag
agcaatataaatgtcatcaatccatcagtttaccaagaaagtagccaagaacaagcttta
ttaaaaggaattatggatgaaaggactaatcaaagtagttctccactggatgttatgatg
caaaactctggccttactttaaatcaactccctaccacaaccgatactaatgtggtgact
ttaggggagttataccactccactactgccaatgattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (66)   
   KEGG ORTHOLOGY (1)   
   RefGene (62)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (76)   

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