KEGG   Citrus sinensis (Valencia orange): 102610957
Entry
102610957         CDS       T02983                                 
Name
(RefSeq) SAGA-associated factor 29 homolog A isoform X1
  KO
K11364  SAGA-associated factor 29
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cit03021]
    102610957
   03036 Chromosome and associated proteins [BR:cit03036]
    102610957
Transcription machinery [BR:cit03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     102610957
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     102610957
    SLIK complex
     102610957
    ADA-HAT complex
     102610957
    ATAC complex
     102610957
SSDB
Motif
Pfam: SGF29_Tudor Tudor_3 Agenet Tudor_5
Other DBs
NCBI-GeneID: 102610957
NCBI-ProteinID: XP_006470215
Position
2:join(6250147..6250270,6251785..6251878,6252160..6252236,6252660..6252769,6252934..6253019,6253860..6253913,6254257..6254407,6254547..6254560,6254749..6254851)
AA seq 270 aa
MMSSAPDIADILDKSRELDRLRKEQEDVLLEINKMHKKLHNTPEVIEKPGDNSLTKLKSL
YIQAKELSENEVHVSNLLVGQLDALLPSGAMGQQRRRIEGGDQKRKRMKNDSDISRLSPS
MRNQLDTCASLKGEQVAARVTAENADKDEWFVVKVMHFDRETKEFEVLDEEPGDDEEGGV
QRKYKLHMSFIIPFPKRNDSSIPEFPPGRHVLAVYPGTTALYKATVVSTPRKRKTDDYLL
EFDDDEEDGALPQRTVPFHNVVPLPEGHRQ
NT seq 813 nt   +upstreamnt  +downstreamnt
atgatgtcgtcggcgccggacattgctgatatcttagacaaatcgagggagctcgatcgg
ttgagaaaagaacaagaggatgtgctccttgaaatcaacaaaatgcacaagaagctgcat
aatactcctgaggtgattgagaaacctggtgataattctttaacgaagctgaaaagttta
tatattcaggcgaaagaactttcagaaaatgaagtccatgtttccaacttgttggttggt
cagctagatgctcttttaccatctggagctatgggacagcaacggagaagaatagaaggt
ggtgatcagaaaaggaaacgaatgaagaatgattctgatatctcaagactttctccttct
atgcgaaatcaacttgatacttgtgctagtctaaagggtgaacaggtggcagctagggtg
acagctgagaatgctgacaaggacgagtggtttgttgtgaaagtaatgcattttgataga
gaaaccaaagaatttgaagtactggatgaggagccaggtgatgatgaagagggtggtgtg
caaagaaagtacaagctgcatatgtcatttattatacctttcccgaagcgaaatgattct
agcatcccggaattcccccctggacgacatgttttggctgtttatccaggaacaactgca
ctctacaaggcaactgttgttagtacccctcgaaagaggaaaacagatgattatttgctg
gaatttgatgatgacgaggaagatggagctttgccgcagcggacagtacccttccacaat
gtggttcccttgcctgagggacatcgccaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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