KEGG   Citrus sinensis (Valencia orange): 102623380
Entry
102623380         CDS       T02983                                 
Name
(RefSeq) lysine--tRNA ligase, chloroplastic/mitochondrial
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    102623380
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cit01007]
    102623380
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cit03016]
    102623380
Enzymes [BR:cit01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     102623380
Amino acid related enzymes [BR:cit01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   102623380
Transfer RNA biogenesis [BR:cit03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    102623380
 Prokaryotic type
   Other AARSs
    102623380
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d Imm5
Other DBs
NCBI-GeneID: 102623380
NCBI-ProteinID: XP_006488943
UniProt: A0A067ETB4
Position
2:complement(join(246443..246535,246643..246819,247051..247141,247260..247354,247581..247787,248029..248133,248239..248331,248515..248622,249468..249536,250232..250289,250562..250670,250885..250996,251117..251335,251710..251916))
AA seq 580 aa
MEALKLWSTLSSLPISFRHVIRRRTSLTFVRCRSSTSITVSAGTRNRRASSSSTSTSDRE
AVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRV
VARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKG
ELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEI
RKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEK
IYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ
GVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS
PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN
AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL
EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ
NT seq 1743 nt   +upstreamnt  +downstreamnt
atggaggctttgaagttgtggagtactctatcctctctaccaatcagcttccgacacgtc
atccgccggcgaacctctttgacgtttgtccgctgtcgctcttccacttctatcaccgtt
tccgccggcactagaaaccgtcgtgcttcatcttcttctacctccacttctgaccgcgag
gccgttcgtgccctgcgcattaagaaggtagaagaattgaggagcaaagggttggagccc
tatgcatataagtgggataggacgcattctgcaaatcagctacaagagatatataggcat
ttagcaaatggtgaagagtcgaatagtgagaatgatcatgtatctgtagctgggagagtt
gttgctcgtagagcatttgggaagcttgcatttttgacactaagagatgactcgggtacg
atacagctttactgcgagaaggaaaggcttttaagtgatcagtttgatcagttaaaggta
tttgttgatattggtgatatactgggtgttagtggctcaatgaaacggacagaaaaaggt
gagctttctgttcttgtcaattcattcgtgattctgacaaaatctctacttccgctacca
gacaaatatcatggtttaactgatgtggataaacgttaccgccaaaggtacgtagatatg
atttcaaaacctgaagtagctgatgtattccggaaaagagcaaagattgtttcagagata
cgcaagacagtggagtctttgggttttgttgaagttgaaactccagttctgcagggagca
gcgggtggagctgaagcaaggccatttgttacatatcataattcacttggaagggatctt
tatctgagaattgcaactgagcttcacttaaagcgaatgttgattggaggattcgaaaaa
atatatgagattggtcgaatattcagaaatgaaggcctttcaacccgccataatcctgaa
tttactacgatagagatgtatgaagcgtattcagactaccaaagcatgatgaacattaca
gaggaaattgttacacactgtgctcttgcagttaatgggaagcttactattgattaccag
ggtgtggagatttgtttggagaggccatggaggagggaaaccatgcacaatcttgtgaaa
gaagctactggaattgatttcaatgagctggggaatgaccttaaggtggctaaagagact
actttgagggcacttggagatgggcttgaaaataaagacaaatttgtcattgaatcgagc
ccttctgttggcaacctccttaatgaggtttttgaaattgttgtagaaccaaagctcgta
caacccacatttgttttggactatcctattgaaatatctcctctagctaaaccacatcga
agacacgcaggcttgactgagagatttgaactgttcatctgcggtcgtgaaatggccaat
gcattttctgaattgactgatcctttggatcagagagcacggttggaagagcaagtgagg
cagcataatgagaagagagcagcagctgtttcagaaaaatcaagtgcgcaagaaaaattg
aaggaaagtgatgaccattcatatgaagtgactcttgatgacgactttgtgactgctttg
gaatatggaatgccaccagcttcagggatggggctcggaattgacaggcttgtgatgctt
ttgacaaactctgccagtattcgtgatgttattgcatttcccatcctaaagattcagcag
tag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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