KEGG   Citrus sinensis (Valencia orange): 102624402
Entry
102624402         CDS       T02983                                 
Name
(RefSeq) endoribonuclease Dicer homolog 3 isoform X2
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cit03036]
    102624402
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    102624402
   microRNA pathway
    RISC loading complex
     102624402
SSDB
Motif
Pfam: Ribonuclease_3 Dicer_dimer Ribonucleas_3_3 Helicase_C ResIII DEAD PAZ SNF2-rel_dom DND1_DSRM AAA_22 Dicer_dsRBD
Other DBs
NCBI-GeneID: 102624402
NCBI-ProteinID: XP_006474520
Position
9:complement(join(30289167..30289374,30289567..30289678,30290089..30290266,30290838..30291164,30291397..30291669,30291979..30292446,30292613..30292822,30292903..30293129,30293423..30293517,30293616..30294139,30294248..30294516,30294921..30295186,30295328..30295546,30295742..30295902,30295990..30296182,30296257..30296362,30296562..30296691,30297084..30297236,30297364..30297495,30297577..30297641,30297935..30298004,30298161..30298295,30298852..30298965,30299063..30299243,30299327..30299469))
AA seq 1652 aa
MHSPLNSLKRSFGEVHSPNPPDMGSSGHDHAVDGPSSSTNSINFIPRIYQLKVFEVAKRR
NTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTVHLVHQQYDVIRVHTDFE
VEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRKAFLSLDIVCFIVIDECHHA
TGNHPYTKIMKEFYHKSDNKPKVFGMTASPVVRKGVSSAMDCEGQISELESTLDSQVFTI
EDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEASWSKFDASLSKLQGSELNCYKDMD
DKHKTLRKQLSDYHAKILYCLDELGLICAYEAVKICLEKVLKAQEECEIYRQSSLQCKYF
LEEVLHVIGSALPLADKIFLDFGFDYSKAVDLGYISTKLHELLQLFLSFGKSTQVLCIIF
VERIIAAKVVERFVKKVPFLTHLTVAYLTGSTTSVDALTPKVQKEVLESFRGGKVNLLFA
TDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILMLERGNLKQRNKLFDI
IRSERSVTDTALSRDPEACFLKACTYVKTKSYIVESTGASVTTDSSVNLIHRYCEMLPSD
KYYTPKPIFKYKSAEEAYECELTLPSNAPFQTIVGPTSRNKNLSKQLVCLEACEKLHQVG
ALNDHLLPSVEEPSENNLISKKNESLPGAGTTKRKELHGTTPIRALSGRWGEKCGVILHA
YKFNFACSIVTEIYSGFVLLIESELDNDVGNFELELYLVSKTVKATVSSSGQVHLDADQM
SKAKCFQELFFNGLFGKLFVKSKSSGSREFLLKRETNSLWSPSYMYLLLPLEIVNTFGDG
SWRINWSGINPCASVVEFIKKKSFLGAAQCNNNGGNSSPCRTSPCKTGCHGMDVIHLANG
SVDVKNLKDMVVLAIHTGRIYSIIEIVSNSSAESPFDGNTDDDSKTFVNYFSEKYGIVLI
HPGQPLLRLKQSHNPHNLLVNFNDGGGSGKGSKSGMNTKKPQMHVHMPPELLVRVNVPIS
VVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALTTLGCCESFSMERL
ELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFD
PRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGSKTIADC
AEALIGAYYVGGGLIAALYMMKWLGIDADLEVSLVDDCITRASLRSYVPRINEIKDIESK
IGYEFTVKFLLQEAITHASVQEFYCYQRLEFLGDSVLDLLITWHLYQSHTDIDPGELTDL
RSASVNNENFAQATVKKNLYKHLQHCSTLLLSQITEYVKSFPKPGETTDSGPSMKAPKAL
GDLLESIVGAVLIDTKLNLDEVWRIFKPILSPIVTPDKLELPPLRELIELCDSLGYFVKE
NCTLKGEMVHAELRLQLKDVLLVGEGQERSRKAAKGKAASQLLKKLEKKRISKGASNTGK
LGDDCRQTTKEDLPEPPSCKRQKGTEAAIPAGDSCKKAYCMTVGTPVVAPINMKKGGPRT
SLFQLCKTMLWPMPTFETTESKSRTPLVFCEGLEKRTGFSSFVSKITLHIPEFGNVECNG
DPRADKKSSFDSAALIMLHELERQGKIIISSS
NT seq 4959 nt   +upstreamnt  +downstreamnt
atgcattcgccattgaattcactgaagcgaagctttggtgaagtacactcaccaaaccca
cctgatatgggctccagtggccatgatcatgctgttgatggcccctcttcttccaccaat
tctatcaacttcatacccagaatttatcaattgaaggtgtttgaagttgcaaagaggagg
aacacaatagctgtgttggagactggagctggcaagactatgatagctgtcatgctcatc
aaagacatcgctcaagctataaagtctaatgggtttaaaaagttgattattttcttggct
ccaactgttcaccttgttcaccagcaatatgatgttattagagttcacacagattttgaa
gtggaagagtactatggagctaagggggttgatgaatgggattcacagtgctggcaaaaa
gaaattaataagaatgatgtactggttatgacccctcaaattctcttggatgccttgagg
aaggcattcttgagtctagatattgtatgcttcattgtgatagatgagtgccatcatgcc
actggcaaccatccgtatacaaaaataatgaaggaattttatcacaaatctgataacaag
ccaaaggtttttggaatgactgcatcacccgtggttagaaaaggcgtctcatcagcaatg
gattgtgagggtcaaatatcagaacttgaaagcaccttggattcgcaggttttcactatt
gaagacaaaacagagatggaagtttttgtcccctcagcgaaagaaagctgtagattttat
gaccaatcaaagttttgtggttcggatttaaaagggaaattggaagcctcatggtctaag
tttgatgcttcattatcaaagttgcaagggtcagagctaaattgttacaaagacatggat
gataaacacaagacactacggaagcagttatctgattaccatgcaaagattttgtattgc
ctcgatgagcttggtctcatatgtgcttatgaggctgttaaaatctgcctagagaaagtt
ctgaaagcccaagaggagtgtgaaatttatagacagagttcactgcagtgtaaatatttt
cttgaggaagtattacatgtaattgggagtgctttgccactggcagacaaaatttttctg
gattttgggtttgactattcaaaggcagtcgatttgggctacatatcaacaaaattacat
gaacttcttcaactatttctatcgtttggcaaatctactcaagtattatgcataattttt
gttgaaagaattattgcggctaaagtagttgaaagatttgtgaagaaagtaccctttttg
actcatctcacggttgcttatctgactggaagtactacatcagttgatgcactgacaccg
aaagtacaaaaagaagtcttggaatcatttcggggtggaaaggtcaatctcttatttgcc
actgatgtcatagaggagggaatgcatgtgcctaattgctcttatgtgatacgttttgac
ttgcccaagacagtcagtagttatattcagtctcgtggacgagctcgacaacataactcc
cagtttatcttgatgcttgagaggggaaacttgaaacaaaggaataaactttttgacatc
atcaggagtgagcggtcggtgacagatacagctctgagtagagaccctgaagcatgcttt
ctgaaggcatgtacctatgtaaaaacaaagtcatatattgtggagtcgactggagcatct
gttactacagattctagtgtcaatctcatacatcgatattgtgaaatgctccccagtgac
aagtactacacacctaagcctatttttaaatacaagtcagctgaagaggcttatgagtgc
gaattgacattaccttcgaatgcgccctttcaaacaatagttggtcctacaagtaggaat
aaaaatttatcaaagcagcttgtttgcttagaagcttgtgaaaagctgcatcaagtgggt
gctctgaatgatcatcttctcccatctgtagaagaaccttcagaaaacaatctcatttcc
aaaaagaacgaatcattgccaggtgcaggaacaacaaaaaggaaggaattacatgggaca
actccgattcgtgcattatctggaagatggggagaaaaatgtggtgtcattttacatgcc
tataaattcaactttgcgtgcagtattgtcactgagatttattctggatttgttctcttg
attgagtcagaacttgataatgatgtgggaaattttgaattggagctgtatttggtctca
aagacagttaaggctactgtttcttcttctgggcaggtgcatttggatgcagatcagatg
tccaaagcaaagtgctttcaggaattattcttcaatggcttgtttggaaagttgtttgtc
aaatccaaatcatccggaagtagagaatttttgcttaagagagaaacaaactcattatgg
agcccatcatacatgtatttgctgctgccgctggagattgttaacacttttggtgacgga
tcttggagaataaattggagcggaatcaatccttgtgcttctgtggtagagtttataaag
aaaaaatcttttttgggtgctgcacaatgcaataataacggaggaaattcatcaccttgt
agaaccagcccatgcaagacaggatgccatggcatggatgtaattcacttagctaacggg
tcagtggatgtgaaaaatcttaaagatatggtagtattggctatccataccggaagaatc
tactctatcattgagatagttagcaattcatcagctgagagtccttttgatggaaacact
gatgatgactcaaaaacctttgtgaactacttcagtgaaaagtatggaattgtgctgata
catcctgggcagcctttgctgcggttgaagcagagtcataacccacacaaccttcttgtg
aatttcaatgatggaggtggttctggtaagggatcaaaatctggtatgaatactaaaaag
ccacaaatgcatgttcacatgccaccggagcttctagtcagagtcaatgttccaattagt
gttgtaaaatcgctttaccttcttccatcagtgatgcaacgtctggagtcactgatgtta
gccagccaacttagggaagagattaattgtcattctagaaacttccatataccaagttca
ttgattctggaagcacttacaacacttggatgttgtgaaagtttttccatggagcgattg
gaattgcttggtgattcagtacttaagtatgctgtaagctgccacctgtttcttacatat
cccaagaaacacgaagggcaactatctgctcggcgttcatgggctgtttgcaactcaacc
cttcataaattgggaactgatcgcaaattacagggatacatacgtgacagtgcatttgat
cctcgccgctgggttgctcctggacagctttctttacgccctgttccttgtgaatgtggg
gtggacactttggaagtaccgctggatggaaaattttttactcaggacacaaaagttgtt
gttggaaagccctgtgacatgggtcacagatggatgggttcaaaaaccatagctgattgt
gctgaagcccttattggggcatactatgttggtggaggattgattgctgcactttatatg
atgaagtggcttggtatagatgctgaccttgaggtctcacttgttgatgattgcattact
agagcatccttaagatcatatgtccccagaatcaatgagattaaggacattgagtcaaag
attgggtatgaatttactgtcaagtttctattacaggaggccattacccatgcatctgtg
caagagttctactgttaccagaggctcgaatttcttggagactctgtactggacctgcta
ataacttggcatctctaccagagccacacagatattgatcctggcgagttgactgacttg
cgctcggcttctgttaataacgaaaattttgctcaagctactgtgaaaaagaacctctat
aagcatcttcaacattgttctacattactactaagtcaaataaccgagtatgtaaagtca
tttcctaaacctggtgagacaacggattcgggcccaagcatgaaagctcctaaagctctt
ggagacctgttggaaagtattgtcggtgctgtgttgattgatacaaagcttaatcttgat
gaagtgtggagaatatttaaaccaatactgtcaccaatcgtgacccctgataaacttgaa
ctgcctccactgcgtgaactgattgaattgtgcgactcacttgggtattttgttaaagaa
aattgtacacttaagggtgaaatggtgcatgcagagctcagattgcagttgaaagatgtt
cttttggttggagaaggccaggagcggagcaggaaggctgcaaaaggaaaagcagcttca
caattgttaaagaaacttgagaaaaaaagaatttccaagggtgcatccaacactgggaaa
ctgggggatgactgcaggcagacgactaaagaagatttaccggagccacctagctgtaaa
aggcagaagggaactgaagctgctataccagctggggactcttgcaagaaagcctactgc
atgactgttggcaccccagttgttgcacccatcaacatgaaaaaaggaggacctcgaacc
tctctttttcaactttgtaagaccatgctttggccaatgcctacgttcgaaacaacagaa
agtaaatcaaggactccgttggtattttgtgaagggcttgaaaagaggacaggatttagc
agctttgtttcgaaaatcactttgcatatacccgaatttggcaatgttgaatgcaatggc
gatcccagagctgacaagaaaagttcatttgactctgcagcacttatcatgcttcatgag
cttgaacgacaggggaaaatcatcattagcagttcctaa

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