KEGG   Citrus sinensis (Valencia orange): 102624586
Entry
102624586         CDS       T02983                                 
Name
(RefSeq) G patch domain-containing protein TGH
  KO
K13123  G patch domain-containing protein 1
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cit03041]
    102624586
Spliceosome [BR:cit03041]
 Complex C
  Other components
   Complex C specific factors
    102624586
SSDB
Motif
Pfam: DUF1604 Surp G-patch
Other DBs
NCBI-GeneID: 102624586
NCBI-ProteinID: XP_024949677
Position
3:complement(join(9011921..9012694,9013587..9013802,9013993..9014121,9014197..9014481,9014924..9015413,9015637..9015784,9016462..9016539,9016695..9016781,9016866..9016941,9017946..9018079,9018767..9018841,9018933..9018994,9020047..9020150,9020716..9020810,9020944..9021034,9021462..9021596))
AA seq 992 aa
MDSDVEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGRRRFHGAFT
GGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSLQF
DTFGSTAAEFARKQAEKEQQQRPSAIPGPAPDELVVPATESIGVKLLLKMGWRRGRSIKD
SHADSLYDARREGRKALLAFSSDDAKTAFNDAEPVDLEQSVNDDGQLSRCTPVYVLNPKQ
DLHGLGYDPYKNAPEFREKKRSRTSGHSKNGRTKALSIKDSLFGLKSGKVAPGFGIGALE
EYDAEDEDLYGADYEFVDTYAEEDEEPSRLSKDVRKKLVGRERQDVLPGFILASKSDYQL
ERFDPPVVPKDFVPHHKFPGPLETDSKLAVPLPPEIPPPEDNNLKLLIEGVATLVARCGK
LFEDISREKNQSNPLFSFLTGGNGHDYYARKLWEARQKRNDQTKLVSDGKSSETAQRLTA
ETRGKLLGERPLEQSARDSSFSVGSENGIQIQFNLSDTFTKSASFNELPEVATPFQDDPV
KQERFERFLKEKYQGGLRSTDSGGASAMSEAARARERLDFEAAAEAIEKAKQRKEGSIST
EQLLGSSGAGRMLFTSGGLEQVKDTQAEDLTNKKVYPRREEFQWRPSPILCKRFDLIDPY
IGKPPPAPRIKSKMDSLIFISDSVKAPRLEESVAANNDRYSAPQSDAPEISRDVTKEIEA
DIQVENVERPVDLYKAIFSDDSDDEVETFNPKKVEDPEKKIEVANTALSHLIAGDFLESL
GKELGLEVPHESPPYPTSKAKNPAQKETSNANAGGNANILPVDNKSSSTRNAVSRTSIER
WMPDQRETAQEGKSQKNEFTPGNPLNVSDKYKETDKYKGEIGCERSKEDEKSKLMSSHHK
NRSSNSSSEDERSRKRSRRHQYSSDSYSDSSSEYRDQHHSRSKGRSKGSSREKSSSRRKH
RKHRDRDSPRRSHNDTEKECTARKKDKKRRRD
NT seq 2979 nt   +upstreamnt  +downstreamnt
atggattcggacgtagaggattacgtgttcttcggcacaccgatagagcgtgaggaagag
atcaccagccgtcgaaagaaatccatcgccgaggcctccggtcacctccgaaccctcgct
ccctggaaacaagaggttacagatgaagaaggaaggagaagatttcatggggcatttacg
ggaggattttctgctggttattacaatactgtgggatcaaaagagggttggactccacaa
actttcacatcatcaaggaagaatagagctgaagtcaaacagcagagcattcttaacttt
ttggatgaagatgagaaagctgaatttgaaggtaaatccttcgggacatctttgcagttt
gacacatttggatctacagctgctgagtttgctcgtaaacaagccgaaaaagagcagcag
caaaggccatcagccatccctggacctgctcccgatgaattagttgttccagccacagag
tctattggtgtaaaattgctgctgaagatgggttggcgacgtggtcgttcaattaaggat
tcacatgcagattcattatatgatgctcgaagggaaggtagaaaagcgctcttagcattt
tcttctgatgatgcaaaaacagcatttaatgatgcagaacctgttgatcttgagcagtca
gttaatgatgatggacagctttctcgctgcacacctgtttatgtactcaatccaaagcag
gacttgcatggtttaggatatgatccttataagaatgctcccgaattcagggagaagaaa
agatcacgcacatctggtcatagcaaaaatggccgtacgaaggctttgtcgataaaagat
agtctttttggcttaaagtcaggaaaggttgctcctgggtttggtattggtgcacttgaa
gaatatgatgccgaagatgaggatctttatggcgctgattatgaatttgtggatacttat
gctgaagaagacgaagagccctccagattgagcaaagacgttaggaaaaagttggtgggc
agggagcggcaggatgtgttgcctggtttcatacttgcatcaaagtctgactaccagttg
gaaagatttgatcctccggttgttccaaaggattttgtccctcaccataagtttcctggg
cctttggagactgacagcaagcttgctgttcccctgccaccagagattcctcctcctgag
gataataatctgaaattgttaatagagggggttgcgactttagtagctcgatgtggaaaa
ttgtttgaggatatttccagagagaagaatcagtcaaatccattgtttagttttctcact
ggaggaaatggccatgattattatgcgaggaagttgtgggaggctcgtcagaaacgtaat
gatcagaccaagctggtaagtgatgggaaatcatctgaaactgctcagaggttgacagca
gagacccgtggcaagttgctaggagagaggccactggaacaaagtgcaagagattcaagc
ttttcagttggttctgaaaatggcattcagatccaatttaatctttctgatacatttacc
aagtctgcatcatttaatgagttgccagaagttgcaacacctttccaagatgatccggta
aagcaagaaagatttgagaggtttctcaaggagaagtatcagggaggacttcgctctaca
gactctggtggagccagtgctatgtcagaagcagctcgtgctcgtgagagattggacttt
gaagctgcagctgaagcaatagagaaagcaaaacagagaaaggaaggctcaatatctaca
gagcagttattggggtcttcaggggctggaaggatgctgttcacttccggaggactagag
caagttaaagatactcaagctgaagatttgacgaataagaaagtttacccaagaagggaa
gagttccaatggcgtccttcacctattctttgcaagcgctttgatctgattgatccttat
ataggaaagccacctccagctccgaggataaaaagcaagatggattctcttatcttcatt
tcagattctgttaaagcccccagattggaagaatctgttgctgcaaataatgatcgatat
tctgcacctcaatctgatgctccagaaataagcagagatgtaacgaaggaaattgaagcc
gatatacaagttgaaaatgttgagaggccggttgacctttacaaggctattttctctgat
gattccgatgatgaagtggaaacatttaatcctaagaaagtggaggatccagaaaagaag
attgaagtggctaatacagcattaagccatttgattgcgggtgacttcttagaatccttg
ggaaaagagctaggtctggaggttccccatgagtcaccaccctacccaacgagtaaagcc
aagaatcctgctcagaaagaaacttctaatgccaatgctggaggaaatgctaatatcctg
cctgttgataacaaatcttcttccacaagaaatgctgttagcagaacatcaatagagcga
tggatgccagatcagagggaaactgctcaagagggcaaatcccagaaaaatgaattcact
cctggtaaccctctgaatgttagtgacaaatataaggagactgataaatataaaggtgaa
attggctgtgaaagatctaaggaggatgaaaaatctaaattaatgtctagccaccataaa
aatagaagcagcaactcatcttcagaagatgaaaggagcagaaaacgatctagacgacac
cagtatagcagtgattcgtatagcgattcatccagcgaatatcgggatcaacaccactct
aggtcaaaagggagaagcaaggggtcctctcgagaaaagagtagcagcagaagaaaacat
cgtaagcatagagatagggactctccccgcagatcacataatgatactgagaaagaatgt
actgcaaggaagaaagataaaaagaggcggagggattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (41)   

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